RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 CASTOR1Q8WTX7 329 aa2.34□□□□□ -2.03
CHD8-207ENST00000554384 SLC35B4Q969S0 331 aa2.34□□□□□ -2.03
CHD8-207ENST00000554384 LYSTQ99698 3801 aa2.34□□□□□ -2.03
CHD8-207ENST00000554384 SNRNP25Q9BV90 132 aaKnown RBP2.34□□□□□ -2.03
CHD8-207ENST00000554384 POTEKPQ9BYX7 375 aa2.34□□□□□ -2.03
CHD8-207ENST00000554384 OR8D2Q9GZM6 311 aa2.34□□□□□ -2.03
CHD8-207ENST00000554384 NSRP1Q9H0G5 558 aaKnown RBP2.34□□□□□ -2.03
CHD8-207ENST00000554384 CHCHD2Q9Y6H1 151 aaPredicted RBP2.34□□□□□ -2.03
CHD8-207ENST00000554384 LINC00854A0A1B0GVQ3 168 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 M0QX08 132 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 PSMD12O00232 456 aaPredicted RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 TXNDC9O14530 226 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 SLC22A1O15245 554 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 FGF16O43320 207 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 MFSD11O43934 449 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 NDUFS6O75380 124 aaKnown RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 YEATS4O95619 227 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 FADS2O95864 444 aaKnown RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 IFNA16P05015 189 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 ZNF22P17026 224 aaPredicted RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 PSMB9P28065 219 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 COILP38432 576 aaPredicted RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 CBX5P45973 191 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 CTBP2P56545 445 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 RAB2AP61019 212 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 SNRPD2P62316 118 aaKnown RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 GNGT1P63211 74 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 MYL5Q02045 173 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 TNFRSF9Q07011 255 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 SCIMPQ6UWF3 145 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 VN1R4Q7Z5H5 301 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 MRPL52Q86TS9 123 aaKnown RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 IFT20Q8IY31 132 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 HS3ST5Q8IZT8 346 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 C3orf22Q8N5N4 141 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 BPIFB6Q8NFQ5 453 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 SKA2Q8WVK7 121 aaPredicted RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 MCEEQ96PE7 176 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 C1QTNF6Q9BXI9 259 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 EBPLQ9BY08 206 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 OR51E2Q9H255 320 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 MCTS1Q9ULC4 181 aaKnown RBP2.33□□□□□ -2.04
CHD8-207ENST00000554384 ARL5AQ9Y689 179 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 WNK2Q9Y3S1 2297 aa2.33□□□□□ -2.04
CHD8-207ENST00000554384 EXPH5Q8NEV8 1989 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 STARD9Q9P2P6 4700 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 DNAH3Q8TD57 4116 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 SMLR1H3BR10 107 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 PFDN1O60925 122 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 LYZL6O75951 148 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 GPR75O95800 540 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 S100A5P33763 92 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 MP68P56378 58 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 APOFQ13790 326 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 LINC00299Q6ZSB3 139 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 TCF23Q7RTU1 214 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 GLT6D1Q7Z4J2 308 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 ZNF738Q8NE65 137 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 RNASEH2CQ8TDP1 164 aaKnown RBP2.32□□□□□ -2.04
CHD8-207ENST00000554384 DGCR14Q96DF8 476 aaKnown RBP2.32□□□□□ -2.04
CHD8-207ENST00000554384 PYURFQ96I23 114 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 ATP6V1G3Q96LB4 118 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 PRAP1Q96NZ9 151 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 HBEGFQ99075 208 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 PRSS27Q9BQR3 290 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 ALX4Q9H161 411 aaPredicted RBP2.32□□□□□ -2.04
CHD8-207ENST00000554384 RNF122Q9H9V4 155 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 KCNIP2Q9NS61 270 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 MS4A12Q9NXJ0 267 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 NAGKQ9UJ70 344 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 PHLDA3Q9Y5J5 127 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 URGCP-MRPS24S4R325 110 aa2.32□□□□□ -2.04
CHD8-207ENST00000554384 NCKAP5O14513 1909 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 A0A1B0GU33 70 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 A0A1W2PNM2 257 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 ATP6V1G2-DDX39BF2Z307 99 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 GOLGA8MH3BSY2 632 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 J3QLI3 93 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 GPR171O14626 319 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 LECT2O14960 151 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 CRXO43186 299 aaPredicted RBP2.31□□□□□ -2.04
CHD8-207ENST00000554384 LY6G6CO95867 125 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 NPPAP01160 153 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 NQO1P15559 274 aaKnown RBP2.31□□□□□ -2.04
CHD8-207ENST00000554384 MIPP30301 263 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 PPP1R2P41236 205 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 RAB8AP61006 207 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 BASP1P80723 227 aaKnown RBP2.31□□□□□ -2.04
CHD8-207ENST00000554384 OR4D1Q15615 310 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 FAM162BQ5T6X4 162 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 C8orf74Q6P047 294 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 DCUN1D2Q6PH85 259 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 SSX7Q7RTT5 188 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 SCXQ7RTU7 201 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 LRP11Q86VZ4 500 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 RPP25LQ8N5L8 163 aaKnown RBP2.31□□□□□ -2.04
CHD8-207ENST00000554384 KRTCAP2Q8N6L1 136 aa2.31□□□□□ -2.04
CHD8-207ENST00000554384 FER1L6-AS1Q8NA97 138 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms