RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 MDFIC2A0A1B0GVS7 189 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 NDUFB3O43676 98 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 LY6HO94772 140 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 EFNB3Q15768 340 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 MIC13Q5XKP0 118 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 TMEM200BQ69YZ2 307 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 R3HDM4Q96D70 268 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 S1PR3Q99500 378 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 RNF114Q9Y508 228 aa11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 YTHDF2Q9Y5A9 579 aaKnown RBP11.96□□□□□ -0.5
PPP4R3A-201ENST00000554308 CRYBG3Q68DQ2 2970 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 VPS13CQ709C8 3753 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 CD99P14209 185 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 ZNF672Q499Z4 452 aaPredicted RBP11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 SPATA31B1PQ5VZV4 182 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 NCOR1P1Q9H4R4 102 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 RAB9BQ9NP90 201 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 CTSZQ9UBR2 303 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 CACNA1BQ00975 2339 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 K7EN84 100 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 SERF1AO75920 110 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 RAB7AP51149 207 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 MRPS11P82912 194 aaKnown RBP11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 LRRC10Q5BKY1 277 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 SSMEM1Q8WWF3 244 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 CIB3Q96Q77 187 aaPredicted RBP11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 MGST2Q99735 147 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 PAM16Q9Y3D7 125 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 LINC00312Q9Y6C7 94 aa11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 UTP20O75691 2785 aaKnown RBP11.95□□□□□ -0.5
PPP4R3A-201ENST00000554308 TPTE2P1Q5T6R2 138 aa11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 HSPB9Q9BQS6 159 aa11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 RPUSD1Q9UJJ7 312 aaKnown RBP11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 NPSP0C0P6 89 aa11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 TCTEX1D1Q8N7M0 179 aa11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 OR10G8Q8NGN5 311 aa11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 CORO2AQ92828 525 aa11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 ZNF714Q96N38 554 aa11.94□□□□□ -0.5
PPP4R3A-201ENST00000554308 TANC2Q9HCD6 1990 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 CSMD1Q96PZ7 3565 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 TRAV3A0A0B4J244 114 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 YPEL3P61236 119 aaPredicted RBP11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 TMEM208Q9BTX3 173 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 GAL3ST2Q9H3Q3 398 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 HCFC1P51610 2035 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 ZNF90Q03938 601 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 BATFQ16520 125 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 ABHD12Q8N2K0 398 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 VN1R17PQ8TDU5 208 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 MRPL18Q9H0U6 180 aaKnown RBP11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 MYO18BQ8IUG5 2567 aa11.93□□□□□ -0.5
PPP4R3A-201ENST00000554308 FOXH1O75593 365 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 GNLYP22749 145 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 ZNF439Q8NDP4 499 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 C1orf159Q96HA4 380 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 GGTLC1Q9BX51 225 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 TNFRSF13BO14836 293 aaPredicted RBP11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 SPINK4O60575 86 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 OR5I1Q13606 314 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 RAB1CQ92928 201 aa11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 SEPSECSQ9HD40 501 aaKnown RBP11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 TET2Q6N021 2002 aaPredicted RBP11.92□□□□□ -0.5
PPP4R3A-201ENST00000554308 CRISP2P16562 243 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 IER3P46695 156 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 REG1BP48304 166 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 DLX1P56177 255 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 ERVK-16P61578 105 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 PRB3Q04118 309 aaPredicted RBP11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 MEF2CQ06413 473 aaPredicted RBP11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 OR4A16Q8NH70 328 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 LINC00574Q9H8X3 128 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 HEYLQ9NQ87 328 aaPredicted RBP11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 COMPP49747 757 aaPredicted RBP11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 TPPP2P59282 170 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 SELENOTP62341 195 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 PDLIM3Q53GG5 364 aaPredicted RBP11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 OR1L6Q8NGR2 347 aa11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 FAM103A1Q9BTL3 118 aaKnown RBP11.91□□□□□ -0.5
PPP4R3A-201ENST00000554308 IGKV1-16P04430 117 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 RPLP1P05386 114 aaKnown RBP11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 LOXP28300 417 aaPredicted RBP11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 OPRK1P41145 380 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 DDB2Q92466 427 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 PRSS46E5RG02 174 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 ITGB1BP1O14713 200 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 BAGE3Q86Y29 109 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 BAGE2Q86Y30 109 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 OR4S2Q8NH73 311 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 TMEM140Q9NV12 185 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 IL36BQ9NZH7 164 aa11.9□□□□□ -0.5
PPP4R3A-201ENST00000554308 FCN1O00602 326 aa11.89□□□□□ -0.51
PPP4R3A-201ENST00000554308 DLEU1O43261 78 aa11.89□□□□□ -0.51
PPP4R3A-201ENST00000554308 CXorf1O96002 111 aa11.89□□□□□ -0.51
PPP4R3A-201ENST00000554308 TFPI2P48307 235 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms