RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 FBXO7Q9Y3I1 522 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 OR2W1Q9Y3N9 320 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 LSM5Q9Y4Y9 91 aaKnown RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 IGLV2-18A0A075B6J9 118 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 A0A0A6YYD4 124 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 IGHV7-81A0A0B4J1V7 117 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 FAM90A8PA6NJQ4 464 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 SRRM4A7MD48 611 aaKnown RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 LINC00473A8K010 186 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 CENPXA8MT69 81 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 ORC5O43913 435 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 CCNKO75909 580 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 IL5P05113 134 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 CRYGBP07316 175 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 FRMD6-AS1P0C7T7 363 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 FAM90A13PP0C7W8 464 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 FAM90A24PP0C7X0 464 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 RPS11P62280 158 aaKnown RBP eCLIP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 RPL30P62888 115 aaKnown RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 FLI1Q01543 452 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 PAX2Q02962 417 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 TRAM1Q15629 374 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 VAMP3Q15836 100 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 BSXQ3C1V8 233 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 CD300EQ496F6 205 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 IGFL4Q6B9Z1 124 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 LAMTOR1Q6IAA8 161 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF773Q6PK81 442 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 Q6ZPA2 131 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 NDUFA11Q86Y39 141 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 UBE2DNLQ8IWF7 75 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 LAX1Q8IWV1 398 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 SGPP2Q8IWX5 399 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 MMD2Q8IY49 270 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 ARRDC1Q8N5I2 433 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 LY6G5BQ8NDX9 201 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 OR11H6Q8NGC7 330 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 OR51S1Q8NGJ8 323 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 ST8SIA2Q92186 375 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 AP3S1Q92572 193 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 BORCS5Q969J3 196 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 SEC22AQ96IW7 307 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 CHRDL1Q9BU40 450 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 Q9N2K0 584 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 AKIP1Q9NQ31 210 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 LIN7CQ9NUP9 197 aaKnown RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 XCL2Q9UBD3 114 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 GHRLQ9UBU3 117 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 OR51B2Q9Y5P1 312 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 IZUMO1RA6ND01 250 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 IGLL5B9A064 214 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 H0YJW9 148 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CCSO14618 274 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 NDUFB8O95169 186 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 IGLV1-47P01700 117 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 PPBPP02775 128 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 IGF1P05019 195 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 OR9G9P0C7N8 305 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 DEFB130BP0DP73 79 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 DEFB130AP0DP74 79 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 LYL1P12980 280 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 FOLR2P14207 255 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 ELK1P19419 428 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 EDN2P20800 178 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 FCGR2BP31994 310 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-205ENST00000554081 NKX2-5P52952 324 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-205ENST00000554081 DEFB131AP59861 70 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 DEFB1P60022 68 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CFHR3Q02985 330 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 TNFRSF9Q07011 255 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 GAGE1Q13065 139 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 ARL6IP1Q15041 203 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 ACTL10Q5JWF8 245 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 TBC1D26Q86UD7 250 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CROCCP3Q8IVE0 287 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CCDC71LQ8N9Z2 235 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 OR4D10Q8NGI6 311 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 OR1L6Q8NGR2 347 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 TMEM56Q96MV1 263 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 SPAG8Q99932 426 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-205ENST00000554081 SMIM3Q9BZL3 60 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 SRD5A3Q9H8P0 318 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CACNG5Q9UF02 275 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 SCP2D1Q9UJQ7 156 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 TRAV26-1A0A087WT03 109 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 TRDV1A0A1B0GX56 115 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 A0A1W2PPQ1 181 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 OR5H14A6NHG9 310 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 DISC1C4P0D8 188 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CREBL2O60519 120 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CA11O75493 328 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF705DP0CH99 300 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF705BP0CI00 300 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CCL1P22362 96 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 GATA2P23769 480 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-205ENST00000554081 NPBWR1P48145 328 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 PPT1P50897 306 aa1.95□□□□□ -2.1
PRPF39-205ENST00000554081 CNN1P51911 297 aaKnown RBP1.95□□□□□ -2.1
PRPF39-205ENST00000554081 RND2P52198 227 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms