RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TMEM116Q8NCL8 245 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 GJC3Q8NFK1 279 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 TRIB1Q96RU8 372 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 TANC2Q9HCD6 1990 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 PDE4DIPQ5VU43 2346 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 A0A087WX48 190 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 TRBV6-6A0A0A6YYG2 114 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 NPIPB11E5RHQ5 1161 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 ZIC3O60481 467 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 IGKV3-11P04433 115 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 CT45A6P0DMU7 189 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 CT45A5P0DMU8 189 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 CT45A7P0DMV0 189 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 FOXA3P55318 350 aaPredicted RBP7.84□□□□□ -1.15
SIX4-202ENST00000554079 FOXI1Q12951 378 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 CT45A1Q5HYN5 189 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 TREML4Q6UXN2 200 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 C20orf204Q6ZNR8 217 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 FAM214BQ7L5A3 538 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 ATP6V0E2Q8NHE4 81 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 CT45A3Q8NHU0 189 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 ST8SIA1Q92185 356 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 COL25A1Q9BXS0 654 aaPredicted RBP7.84□□□□□ -1.15
SIX4-202ENST00000554079 TMEM133Q9H2Q1 129 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 RALYQ9UKM9 306 aaKnown RBP7.84□□□□□ -1.15
SIX4-202ENST00000554079 ZNF407Q9C0G0 2248 aa7.84□□□□□ -1.15
SIX4-202ENST00000554079 PTPRBP23467 1997 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 K7ERJ3 54 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 THBDP07204 575 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 CAMPP49913 170 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 ATP5J2P56134 94 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 TMPRSS3P57727 454 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 CATR1Q13166 79 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 EFNB3Q15768 340 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 ABHD17BQ5VST6 288 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 RHBDD2Q6NTF9 364 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 LINC00696Q6ZRV3 163 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 NABP1Q96AH0 204 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 SNRNP40Q96DI7 357 aaKnown RBP7.83□□□□□ -1.16
SIX4-202ENST00000554079 PLPPR2Q96GM1 343 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 HS3ST6Q96QI5 342 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 ZNF747Q9BV97 191 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 VPREB3Q9UKI3 123 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 H3BMG7 143 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 BCL3P20749 454 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 CRYGSP22914 178 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 CD24P25063 80 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 PPP1CAP62136 330 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 TM4SF20Q53R12 229 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 Q6AWC8 147 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 C1orf159Q96HA4 380 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 RAB1BQ9H0U4 201 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 IL23AQ9NPF7 189 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 HEYLQ9NQ87 328 aaPredicted RBP7.83□□□□□ -1.16
SIX4-202ENST00000554079 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.83□□□□□ -1.16
SIX4-202ENST00000554079 ZNF355PQ9NSJ1 428 aa7.83□□□□□ -1.16
SIX4-202ENST00000554079 RP1P56715 2156 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 PRSS38A1L453 326 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 GGTLC3B5MD39 225 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 IGLL5B9A064 214 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 PRSS46E5RG02 174 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 FNDC10F2Z333 226 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 H3BML4 177 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 HSPB6O14558 160 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 KLK10O43240 276 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 EFNA2O43921 213 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 IGHG4P01861 327 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 CELA2BP08218 269 aaPredicted RBP7.82□□□□□ -1.16
SIX4-202ENST00000554079 PF4V1P10720 104 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 G6PCP35575 357 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 GAGE13Q4V321 117 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 SPINK9Q5DT21 86 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 ZADH2Q8N4Q0 377 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 CCL4L1Q8NHW4 92 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 Q8TCH9 128 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 TMUB1Q9BVT8 246 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 GCM1Q9NP62 436 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 DUSP13Q9UII6 198 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 ADAMTS20P59510 1910 aa7.82□□□□□ -1.16
SIX4-202ENST00000554079 FAM90A27PA6NNH2 459 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 HIGD1CA8MV81 97 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 C16orf97H3BN30 126 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 MGST3O14880 152 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 APOMO95445 188 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 MYF5P13349 255 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 DRAM1Q8N682 238 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 SPTSSAQ969W0 71 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 SLC25A10Q9UBX3 287 aaPredicted RBP7.81□□□□□ -1.16
SIX4-202ENST00000554079 TEX50A0A1B0GTY4 177 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 FAM90A9PA6NNJ1 464 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 ZNF138P52744 262 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 FGF12P61328 243 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 HBBP68871 147 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 PCP2Q8IVA1 136 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 CITED1Q99966 193 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 POLDIP2Q9Y2S7 368 aa7.81□□□□□ -1.16
SIX4-202ENST00000554079 PRSS29PA6NIE9 313 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 FABP5P3A8MUU1 101 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 A8MWL6 223 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 CCDC179H3BU77 68 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms