RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CTRB2Q6GPI1 263 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 LAMTOR1Q6IAA8 161 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 SLC51BQ86UW2 128 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 SCGB1C1Q8TD33 95 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 CACNG8Q8WXS5 425 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 MISP3Q96FF7 219 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 DUX5Q96PT3 197 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 TMEM147Q9BVK8 224 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 ZNF471Q9BX82 626 aaPredicted RBP8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 ZNF355PQ9NSJ1 428 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 FBXL17Q9UF56 701 aa8.26□□□□□ -1.09
TMEM55B-205ENST00000554028 CSPG4Q6UVK1 2322 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 SMCO3A2RU48 225 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 FBXO24O75426 580 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 EGR2P11161 476 aaPredicted RBP8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 OPRK1P41145 380 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 CRIP2P52943 208 aaPredicted RBP8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 HILS1P60008 231 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 DLK1P80370 383 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 NDPQ00604 133 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 EIF5AL1Q6IS14 154 aaKnown RBP8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 STPG2Q8N412 459 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 OR5T1Q8NG75 326 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 FAM110DQ8TAY7 271 aaPredicted RBP8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 SLC35E1Q96K37 410 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 ATP5SQ99766 215 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 UQCC1Q9NVA1 299 aa8.25□□□□□ -1.09
TMEM55B-205ENST00000554028 LINC01548A6NM66 108 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 FNDC10F2Z333 226 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 TCF21O43680 179 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 TPT1P13693 172 aaKnown RBP8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 UBA52P62987 128 aaKnown RBP8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 SLC35B1P78383 322 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 RAB31Q13636 194 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 ZNF709Q8N972 641 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 OR2T6Q8NHC8 308 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 NPVFQ9HCQ7 196 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 ZNF580Q9UK33 172 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 FBXO7Q9Y3I1 522 aa8.24□□□□□ -1.09
TMEM55B-205ENST00000554028 PMS2P5A8MQ11 134 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 H3BUA1 57 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 SCGB2A1O75556 95 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 RNASE1P07998 156 aaKnown RBP8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 AKR1C1Q04828 323 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 CD69Q07108 199 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 ARL16Q0P5N6 197 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 ASPHD1Q5U4P2 390 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 RPL7L1Q6DKI1 246 aaKnown RBP8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 UBAC2Q8NBM4 344 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 GNPNAT1Q96EK6 184 aaPredicted RBP8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 OTOGQ6ZRI0 2925 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 VPS13CQ709C8 3753 aa8.23□□□□□ -1.09
TMEM55B-205ENST00000554028 C2CD3Q4AC94 2353 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 ZANQ9Y493 2812 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 HIVEP2P31629 2446 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 CSMD1Q96PZ7 3565 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 UBE2L5PA0A1B0GUS4 154 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 C17orf112F2Z3M2 114 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 G3V318 75 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 MPDU1O75352 247 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 PVRIGQ6DKI7 326 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 ACSM6Q6P461 480 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 SLC16A13Q7RTY0 426 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 CENPVQ7Z7K6 275 aaPredicted RBP8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 HAPLN4Q86UW8 402 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 BAP18Q8IXM2 172 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 NECAP1Q8NC96 275 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 TMEM170AQ8WVE7 144 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 BSCL2Q96G97 398 aaPredicted RBP8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 PARD6GQ9BYG4 376 aaPredicted RBP8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 SLA2Q9H6Q3 261 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 ZNF702PQ9H963 129 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 LINC00527Q9UJ94 153 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 FBXL7Q9UJT9 491 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 NAV3Q8IVL0 2385 aa8.22□□□□□ -1.09
TMEM55B-205ENST00000554028 IGLV11-55A0A075B6I3 123 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 TMEM89A2RUT3 159 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 MT-CO2P00403 227 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 IFNA7P01567 189 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 PRH1P02810 166 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 PF4V1P10720 104 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 NPBWR1P48145 328 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 MFAP4P55083 255 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 VWC2Q2TAL6 325 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 TEPPQ6URK8 271 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 TMEM144Q7Z5S9 345 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 Q8N2B8 174 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 STOML3Q8TAV4 291 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 ST8SIA2Q92186 375 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 PHYHIPLQ96FC7 376 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 ACY3Q96HD9 319 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 CXorf58Q96LI9 332 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 NOL4LQ96MY1 436 aaPredicted RBP8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 WDR61Q9GZS3 305 aaKnown RBP8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 WFDC1Q9HC57 220 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 ESM1Q9NQ30 184 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 CYTL1Q9NRR1 136 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 GAR1Q9NY12 217 aaKnown RBP8.21□□□□□ -1.1
TMEM55B-205ENST00000554028 ACANP16112 2415 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms