RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 ST8SIA3O43173 380 aa13.5□□□□□ -0.25
CLMN-202ENST00000553733 EWSR1Q01844 656 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLMN-202ENST00000553733 PINX1Q96BK5 328 aaKnown RBP13.5□□□□□ -0.25
CLMN-202ENST00000553733 NXF2Q9GZY0 626 aaKnown RBP13.5□□□□□ -0.25
CLMN-202ENST00000553733 SMPXQ9UHP9 88 aa13.5□□□□□ -0.25
CLMN-202ENST00000553733 C3orf85A0A1B0GTC6 90 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 INS-IGF2F8WCM5 200 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 NUPL2O15504 423 aaKnown RBP13.49□□□□□ -0.25
CLMN-202ENST00000553733 AKR1C2P52895 323 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 MFAP4P55083 255 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 RELQ04864 619 aaPredicted RBP13.49□□□□□ -0.25
CLMN-202ENST00000553733 ZNF124Q15973 351 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 SP6Q3SY56 376 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 PVRIGQ6DKI7 326 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 TMEM229BQ8NBD8 167 aa13.49□□□□□ -0.25
CLMN-202ENST00000553733 MRPS26Q9BYN8 205 aaKnown RBP13.49□□□□□ -0.25
CLMN-202ENST00000553733 IGHV3OR16-13A0A075B7E8 117 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 IGHV3-74A0A0B4J1X5 117 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 CTDSP2O14595 271 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 UCP1P25874 307 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 TAS2R19P59542 299 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 SCGB2B2Q4G0G5 96 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 LHFPL5Q8TAF8 219 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 MARCH1Q8TCQ1 289 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 TXN2Q99757 166 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 RHPN1-AS1Q9BWJ2 59 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 ZFAND3Q9H8U3 227 aa13.48□□□□□ -0.25
CLMN-202ENST00000553733 MRPL36Q9P0J6 103 aaKnown RBP13.48□□□□□ -0.25
CLMN-202ENST00000553733 OR4C46A6NHA9 309 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 GABARAPH6UMI1 98 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 GNG7O60262 68 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 RAB3DO95716 219 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 RNASE2P10153 161 aaKnown RBP13.47□□□□□ -0.25
CLMN-202ENST00000553733 FAM90A2PQ658T7 463 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 LAMTOR1Q6IAA8 161 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 STEAP1BQ6NZ63 245 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 WFDC3Q8IUB2 231 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 SLC35G3Q8N808 338 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 TMEM116Q8NCL8 245 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 TERB2Q8NHR7 220 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 SMIM4Q8WVI0 70 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 COPZ2Q9P299 210 aa13.47□□□□□ -0.25
CLMN-202ENST00000553733 A0A0J9YWU9 116 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 YIF1AO95070 293 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 OR5AC1P0C628 307 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 ERHP84090 104 aaKnown RBP13.46□□□□□ -0.25
CLMN-202ENST00000553733 TRIM16LQ309B1 348 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 TOMM20LQ6UXN7 152 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 Q6ZRM9 215 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 GPR141Q7Z602 305 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 APRG1Q8IVJ8 170 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 IL17DQ8TAD2 202 aa13.46□□□□□ -0.25
CLMN-202ENST00000553733 FNDC4Q9H6D8 234 aaPredicted RBP13.46□□□□□ -0.25
CLMN-202ENST00000553733 RGS5O15539 181 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 APOHP02749 345 aaPredicted RBP13.45□□□□□ -0.26
CLMN-202ENST00000553733 RPL35AP18077 110 aaKnown RBP13.45□□□□□ -0.26
CLMN-202ENST00000553733 ETV6P41212 452 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 APOC4P55056 127 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 BSXQ3C1V8 233 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 Q6ZWC4 215 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 LILRB2Q8N423 598 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 CCDC71LQ8N9Z2 235 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 OR4C16Q8NGL9 310 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 ST8SIA2Q92186 375 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 RTBDNQ9BSG5 229 aaPredicted RBP13.45□□□□□ -0.26
CLMN-202ENST00000553733 TP53TG1Q9Y2A0 90 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 BIRC6Q9NR09 4857 aa13.45□□□□□ -0.26
CLMN-202ENST00000553733 IGKV3-7A0A075B6H7 116 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 A0A1B0GU03 582 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 TFPI2P48307 235 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 HOXA1P49639 335 aaPredicted RBP13.44□□□□□ -0.26
CLMN-202ENST00000553733 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
CLMN-202ENST00000553733 AARDQ4LEZ3 155 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 LYG2Q86SG7 212 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 ZFAND1Q8TCF1 268 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 DYNC2LI1Q8TCX1 351 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 C15orf40Q8WUR7 153 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 TMEM222Q9H0R3 208 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 VSIRQ9H7M9 311 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 MAP6D1Q9H9H5 199 aa13.44□□□□□ -0.26
CLMN-202ENST00000553733 PUS1Q9Y606 427 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLMN-202ENST00000553733 TRAV14DV4A0A0A6YYC5 116 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 KIR2DL5BA0A0G2JN68 375 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 KIR2DL5BA0A0G2JPC4 375 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 SPRY2O43597 315 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 IFNA17P01571 189 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 CLVS1Q8IUQ0 354 aaPredicted RBP13.43□□□□□ -0.26
CLMN-202ENST00000553733 KIR2DL5AQ8N109 375 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 KIR2DL5BQ8NHK3 375 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 GLYATL2Q8WU03 294 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 RNF183Q96D59 192 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 NAA60Q9H7X0 242 aa13.43□□□□□ -0.26
CLMN-202ENST00000553733 CCDC59Q9P031 241 aaKnown RBP13.43□□□□□ -0.26
CLMN-202ENST00000553733 JTBO76095 146 aa13.42□□□□□ -0.26
CLMN-202ENST00000553733 CDS2O95674 445 aa13.42□□□□□ -0.26
CLMN-202ENST00000553733 BMI1P35226 326 aa13.42□□□□□ -0.26
CLMN-202ENST00000553733 SNCAP37840 140 aa13.42□□□□□ -0.26
CLMN-202ENST00000553733 MRPS10P82664 201 aaKnown RBP13.42□□□□□ -0.26
CLMN-202ENST00000553733 TNFRSF9Q07011 255 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms