RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PCSK5Q92824 1860 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 C17orf100A8MU93 164 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 SIRPB1O00241 398 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 PRKNO60260 465 aaPredicted RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 YPEL1O60688 119 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 GATA2P23769 480 aaPredicted RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 CCKBRP32239 447 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 CA7P43166 264 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 PPP1CAP62136 330 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 RPL8P62917 257 aaKnown RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 PSG5Q15238 335 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 C1QL3Q5VWW1 255 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 OTPQ5XKR4 325 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 PWWP2BQ6NUJ5 590 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 FAM57BQ71RH2 274 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 DTX2Q86UW9 622 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 VKORC1L1Q8N0U8 176 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 LINC01561Q8N1V8 128 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 LINC00482Q8N8I6 264 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 SUMF1Q8NBK3 374 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 OR5D14Q8NGL3 314 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 OR5H2Q8NGV7 314 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 ZNF501Q96CX3 271 aaPredicted RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 YPEL2Q96QA6 119 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 CDX2Q99626 313 aaPredicted RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 PLA2G12AQ9BZM1 189 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 C5orf66Q9H5L9 145 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 CMC2Q9NRP2 79 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 TP73-AS1Q9UF72 201 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 B9D1Q9UPM9 204 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 F5P12259 2224 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 SPEGQ15772 3267 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 IGHV1OR21-1A0A087WYE8 117 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 A0A1B0GX78 115 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 C9orf118A6NHY6 69 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 J3QLI3 93 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 SYNGR1O43759 233 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 PFN1P07737 140 aaKnown RBP3.34□□□□□ -1.88
RDH11-204ENST00000553578 ASAH2BP0C7U1 165 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 FKBP2P26885 142 aaKnown RBP3.34□□□□□ -1.88
RDH11-204ENST00000553578 SSR2P43308 183 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 NCBP2P52298 156 aaKnown RBP eCLIP3.34□□□□□ -1.88
RDH11-204ENST00000553578 PSG4Q00888 419 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 ICAM4Q14773 271 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 ZNF506Q5JVG8 444 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 SHISA6Q6ZSJ9 500 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 SYS1Q8N2H4 156 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 TMEM99Q8N816 258 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 OR51G1Q8NGK1 321 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 SAP25Q8TEE9 199 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 PIGCQ92535 297 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 C2orf50Q96LR7 162 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 VSIG4Q9Y279 399 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 CEP290O15078 2479 aa3.34□□□□□ -1.88
RDH11-204ENST00000553578 A0A087WX48 190 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 TRAV1-2A0A0B4J238 106 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 LOC107984640A0A0U1RRK4 108 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 DUXBA0A1W2PPF3 345 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 C17orf112F2Z3M2 114 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 DHHO43323 396 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 TMEM50AO95807 157 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 C3orf79P0CE67 100 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 CT45A6P0DMU7 189 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 CT45A5P0DMU8 189 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 CT45A7P0DMV0 189 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 LOXP28300 417 aaPredicted RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 G6PCP35575 357 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 VDAC2P45880 294 aaPredicted RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 XGP55808 180 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 CT45A1Q5HYN5 189 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 FOXL2NBQ6ZUU3 175 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 TCF23Q7RTU1 214 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 SH2D6Q7Z4S9 175 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 BPIFA4PQ86YQ2 179 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 CT45A3Q8NHU0 189 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 CCL4L1Q8NHW4 92 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 APOBEC3DQ96AK3 386 aaPredicted RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 SDF2L1Q9HCN8 221 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 FAM60AQ9NP50 221 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 DLL3Q9NYJ7 618 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 ZNF257Q9Y2Q1 563 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 RP1P56715 2156 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 TRBV6-7A0A0A0MS04 114 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 TRAV24A0A0B4J272 114 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 A0A0J9YW62 118 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 A0A1B0GWB2 263 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 IGKV1D-16P01601 117 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 IGLL1P15814 213 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 GAGE2BQ13066 116 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 PRDX4Q13162 271 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 HLA-DRB5Q30154 266 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 GAGE2EQ4V326 116 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 C6orf226Q5I0X4 101 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 HES3Q5TGS1 186 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 UFSP1Q6NVU6 142 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 SLC25A42Q86VD7 318 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 LYPD6Q86Y78 171 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 FLYWCH2Q96CP2 140 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms