RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 FAM71F2Q6NXP2 309 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 LPCAT3Q6P1A2 487 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 DHRS11Q6UWP2 260 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF818PQ6ZRF7 136 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 NDUFA11Q86Y39 141 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 CMTM1Q8IZ96 169 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 SPAG16Q8N0X2 631 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 FAM71E2Q8N5Q1 922 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 NHLRC2Q8NBF2 726 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 NPBQ8NG41 125 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 GPX8Q8TED1 209 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 GIMAP1Q8WWP7 306 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 C5orf30Q96GV9 206 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 HSD17B10Q99714 261 aaKnown RBP3.63□□□□□ -1.83
ATXN3-220ENST00000553491 RNF5Q99942 180 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 MIXL1Q9H2W2 232 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 MCUBQ9NWR8 336 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 COA4Q9NYJ1 87 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 PAIP2BQ9ULR5 123 aaKnown RBP3.63□□□□□ -1.83
ATXN3-220ENST00000553491 IGHV7-81A0A0B4J1V7 117 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 C13orf42A0A1B0GVH6 325 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF320A2RRD8 509 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 DISC1C4P0D8 188 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 GABARAPH6UMI1 98 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 GPR31O00270 319 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ST8SIA3O43173 380 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 RAMP3O60896 148 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 PGLYRP1O75594 196 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-220ENST00000553491 SNAPC5O75971 98 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 OR2A4O95047 310 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 KRASP01116 189 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 HLA-DRB1P01911 266 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 CD3DP04234 171 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 DEFA4P12838 97 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 GNRHRP30968 328 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 KIR2DS2P43631 304 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 RAB9AP51151 201 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 TPPP2P59282 170 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 TAS2R19P59542 299 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ERVK-16P61578 105 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 RPL23AP62750 156 aaKnown RBP3.62□□□□□ -1.83
ATXN3-220ENST00000553491 DEFA6Q01524 100 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 RGS21Q2M5E4 152 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 DEFB136Q30KP8 78 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 DEFB121Q5J5C9 76 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 TCTEX1D4Q5JR98 221 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF57Q68EA5 555 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-220ENST00000553491 PYHIN1Q6K0P9 492 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 FAAP20Q6NZ36 180 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 STEAP1BQ6NZ63 245 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF562Q6V9R5 426 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 TRPT1Q86TN4 253 aaKnown RBP3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF695Q8IW36 515 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 COMMD1Q8N668 190 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 STPG4Q8N801 248 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 TMEM229BQ8NBD8 167 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 RNASE11Q8TAA1 199 aaKnown RBP3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ZFAND1Q8TCF1 268 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 MARCH1Q8TCQ1 289 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ARPC1AQ92747 370 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 OR2A7Q96R45 310 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 TOLLIPQ9H0E2 274 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF430Q9H8G1 570 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-220ENST00000553491 CCDC59Q9P031 241 aaKnown RBP3.62□□□□□ -1.83
ATXN3-220ENST00000553491 COPZ2Q9P299 210 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 MTFP1Q9UDX5 166 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 C14orf166Q9Y224 244 aaKnown RBP3.62□□□□□ -1.83
ATXN3-220ENST00000553491 NUBP2Q9Y5Y2 271 aa3.62□□□□□ -1.83
ATXN3-220ENST00000553491 G3V4G9 280 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 CCL24O00175 119 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 ARPC1BO15143 372 aaKnown RBP3.61□□□□□ -1.83
ATXN3-220ENST00000553491 NDUFA3O95167 84 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 HPRT1P00492 218 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 IGLV2-23P01705 113 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 IGLV2-11P01706 119 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 PRH1P02810 166 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 PRB2P02812 416 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-220ENST00000553491 REG1AP05451 166 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 SERPINE2P07093 398 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 AKAIN1P0CW23 69 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 SAA1P0DJI8 122 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-220ENST00000553491 IGLL1P15814 213 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 NQO2P16083 231 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 AKR1C4P17516 323 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 G6PCP35575 357 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 UBE2KP61086 200 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 DEFA5Q01523 94 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 MEF2DQ14814 521 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 PRSS8Q16651 343 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 TRIM16LQ309B1 348 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 SP6Q3SY56 376 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 SPANXN2Q5MJ10 180 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 OR4A47Q6IF82 309 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 BTNL8Q6UX41 500 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 H2BFWTQ7Z2G1 175 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 SLC38A6Q8IZM9 456 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 UXS1Q8NBZ7 420 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 OR11H1Q8NG94 326 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms