RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CTSGP08311 255 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 MIFP14174 115 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 C4BPBP20851 252 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 MALP21145 153 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 GADD45AP24522 165 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 CALRP27797 417 aaKnown RBP5.23□□□□□ -1.57
ATXN3-219ENST00000553488 TFPI2P48307 235 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 CMC4P56277 68 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-219ENST00000553488 OR10A3P58181 314 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 VAMP2P63027 116 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 ZNF773Q6PK81 442 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 NR2C2APQ86WQ0 139 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 C8orf59Q8N0T1 100 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-219ENST00000553488 DHRSXQ8N5I4 330 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 FAM24BQ8N5W8 94 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 BPIFB6Q8NFQ5 453 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 SCARB1Q8WTV0 552 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 UFD1Q92890 307 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 QTRT1Q9BXR0 403 aaKnown RBP5.23□□□□□ -1.57
ATXN3-219ENST00000553488 C21orf62Q9NYP8 219 aa5.23□□□□□ -1.57
ATXN3-219ENST00000553488 F11RQ9Y624 299 aaKnown RBP5.23□□□□□ -1.57
ATXN3-219ENST00000553488 IGKV3-7A0A075B6H7 116 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 IGHV3-49A0A0A0MS15 119 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 PGPEP1LA6NFU8 196 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 TNFSF12O43508 249 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 CDK2AP2O75956 126 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 CTXN2P0C2S0 81 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 P0DMU3 169 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 FAM231AP0DMU4 169 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 FAM231CP0DMU5 169 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 TAS2R31P59538 309 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 FABP5Q01469 135 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 MSMO1Q15800 293 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 LEMD1Q68G75 181 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 THOC7Q6I9Y2 204 aaKnown RBP5.22□□□□□ -1.57
ATXN3-219ENST00000553488 CNIH2Q6PI25 160 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 TRPT1Q86TN4 253 aaKnown RBP5.22□□□□□ -1.57
ATXN3-219ENST00000553488 SPAG16Q8N0X2 631 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 GBGT1Q8N5D6 347 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 PACRGLQ8N7B6 248 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 TMEM116Q8NCL8 245 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 NUDCD2Q8WVJ2 157 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 AIFM2Q9BRQ8 373 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 COMMD5Q9GZQ3 224 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 HRASLSQ9HDD0 168 aa5.22□□□□□ -1.57
ATXN3-219ENST00000553488 IGHV3OR16-13A0A075B7E8 117 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 DEFB131BA0A096LNP1 70 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 IGHV3-74A0A0B4J1X5 117 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 TRAV2A0A0B4J234 112 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 IFITM5A6NNB3 132 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 NUPL2O15504 423 aaKnown RBP5.21□□□□□ -1.58
ATXN3-219ENST00000553488 SSX5O60225 188 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 DFFBO76075 338 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 HPRT1P00492 218 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 OR13C7P0DN81 318 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 NQO2P16083 231 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 PSMA1P25786 263 aaKnown RBP5.21□□□□□ -1.58
ATXN3-219ENST00000553488 TALDO1P37837 337 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 DEFB131AP59861 70 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 TRAM1Q15629 374 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 C12orf74Q32Q52 190 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 HACD4Q5VWC8 232 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 SLC25A24Q6NUK1 477 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 ZNF767PQ75MW2 155 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 HSD17B13Q7Z5P4 300 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-219ENST00000553488 C10orf67Q8IYJ2 551 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 UBAC2Q8NBM4 344 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 CSNK1G2-AS1Q8NCQ2 148 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 DGCR14Q96DF8 476 aaKnown RBP5.21□□□□□ -1.58
ATXN3-219ENST00000553488 DCSTAMPQ9H295 470 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 MS4A6AQ9H2W1 248 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 VSIRQ9H7M9 311 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 C8orf4Q9NR00 106 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 CCL28Q9NRJ3 127 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 NDUFA4L2Q9NRX3 87 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 ANXA10Q9UJ72 324 aa5.21□□□□□ -1.58
ATXN3-219ENST00000553488 TEX50A0A1B0GTY4 177 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 TMEM235A6NFC5 223 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 ERICH4A6NGS2 130 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 I3L2K1 104 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 SULT1C2O00338 296 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 CYB5BO43169 146 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 APOHP02749 345 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-219ENST00000553488 TRAPPC2P0DI81 140 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 TRAPPC2BP0DI82 140 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 SPP1P10451 314 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 RANBP1P43487 201 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 RELQ04864 619 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-219ENST00000553488 MLLT11Q13015 90 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-219ENST00000553488 ARL6IP1Q15041 203 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 CDNFQ49AH0 187 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 Q56UQ5 140 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 TMEM41BQ5BJD5 291 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 MORN3Q6PF18 240 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-219ENST00000553488 TCF24Q7RTU0 167 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 MAPKAPK5-AS1Q8N8E1 139 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 OR1L8Q8NGR8 309 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 OR13F1Q8NGS4 319 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 SECTM1Q8WVN6 248 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 GIMAP1Q8WWP7 306 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms