RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 C6orf62Q9GZU0 229 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-207ENST00000553290 C5orf66Q9H5L9 145 aa9.72□□□□□ -0.85
ACTN1-207ENST00000553290 SELENOKQ9Y6D0 94 aa9.72□□□□□ -0.85
ACTN1-207ENST00000553290 DNAH7Q8WXX0 4024 aa9.72□□□□□ -0.85
ACTN1-207ENST00000553290 A0A0B4J293 547 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 RBMY1BA6NDE4 496 aaKnown RBP9.71□□□□□ -0.86
ACTN1-207ENST00000553290 RBMY1EA6NEQ0 496 aaKnown RBP9.71□□□□□ -0.86
ACTN1-207ENST00000553290 C15orf62A8K5M9 175 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 NUPL2O15504 423 aaKnown RBP9.71□□□□□ -0.86
ACTN1-207ENST00000553290 MT-CO2P00403 227 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 IFNA17P01571 189 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 RBMY1DP0C7P1 496 aaKnown RBP9.71□□□□□ -0.86
ACTN1-207ENST00000553290 SNCAP37840 140 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 IZUMO4Q1ZYL8 232 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 CASC10Q5T4H9 136 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 LAMTOR1Q6IAA8 161 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 FAAP20Q6NZ36 180 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 RNASE11Q8TAA1 199 aaKnown RBP9.71□□□□□ -0.86
ACTN1-207ENST00000553290 SPAG8Q99932 426 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-207ENST00000553290 PRRT1Q99946 306 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 C20orf24Q9BUV8 137 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 TMEM222Q9H0R3 208 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 WFDC10AQ9H1F0 79 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 HIPK2Q9H2X6 1198 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 EDA2RQ9HAV5 297 aa9.71□□□□□ -0.86
ACTN1-207ENST00000553290 RSL24D1Q9UHA3 163 aaKnown RBP9.71□□□□□ -0.86
ACTN1-207ENST00000553290 TEX13DA0A0J9YY54 714 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-207ENST00000553290 H3BMQ9 156 aa9.7□□□□□ -0.86
ACTN1-207ENST00000553290 TSPAN4O14817 238 aa9.7□□□□□ -0.86
ACTN1-207ENST00000553290 ST8SIA3O43173 380 aa9.7□□□□□ -0.86
ACTN1-207ENST00000553290 GSTZ1O43708 216 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-207ENST00000553290 CDS2O95674 445 aa9.7□□□□□ -0.86
ACTN1-207ENST00000553290 SUB1P53999 127 aaKnown RBP eCLIP9.7□□□□□ -0.86
ACTN1-207ENST00000553290 FAM219AQ8IW50 185 aa9.7□□□□□ -0.86
ACTN1-207ENST00000553290 OR4C16Q8NGL9 310 aa9.7□□□□□ -0.86
ACTN1-207ENST00000553290 PINX1Q96BK5 328 aaKnown RBP9.7□□□□□ -0.86
ACTN1-207ENST00000553290 RTBDNQ9BSG5 229 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-207ENST00000553290 SLIRPQ9GZT3 109 aaKnown RBP9.7□□□□□ -0.86
ACTN1-207ENST00000553290 GPR132Q9UNW8 380 aa9.7□□□□□ -0.86
ACTN1-207ENST00000553290 ANKRD20A5PA0PJZ0 165 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 CORTO00230 105 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 GNG7O60262 68 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 OR5AC1P0C628 307 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 TNFSF8P32971 234 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 DHODHQ02127 395 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 SPINK9Q5DT21 86 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 GLYATL2Q8WU03 294 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 RBPMSQ93062 196 aaKnown RBP9.69□□□□□ -0.86
ACTN1-207ENST00000553290 NXF2Q9GZY0 626 aaKnown RBP9.69□□□□□ -0.86
ACTN1-207ENST00000553290 NAA60Q9H7X0 242 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 ENY2Q9NPA8 101 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 SCP2D1Q9UJQ7 156 aa9.69□□□□□ -0.86
ACTN1-207ENST00000553290 A0A0G2JRQ6 117 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 FABP12A6NFH5 140 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 CRYM-AS1A6NIL9 109 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 ETV6P41212 452 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 NPBWR1P48145 328 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 HOXA1P49639 335 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-207ENST00000553290 PVRIGQ6DKI7 326 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 DUSP18Q8NEJ0 188 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 OR51S1Q8NGJ8 323 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 MCFD2Q8NI22 146 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 OR10C1Q96KK4 312 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 SCGB3A2Q96PL1 93 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 SOSTQ9BQB4 213 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-207ENST00000553290 SMPXQ9UHP9 88 aa9.68□□□□□ -0.86
ACTN1-207ENST00000553290 IGHV3OR16-8A0A075B7F1 116 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 LOC102724200A0A096LPH7 203 aaPredicted RBP9.67□□□□□ -0.86
ACTN1-207ENST00000553290 IGHV7-4-1A0A0J9YVY3 117 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 ZNF207O43670 478 aaKnown RBP9.67□□□□□ -0.86
ACTN1-207ENST00000553290 YIF1AO95070 293 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 IGHV3-48P01763 117 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 RNASE2P10153 161 aaKnown RBP9.67□□□□□ -0.86
ACTN1-207ENST00000553290 SPCS3P61009 180 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 AARDQ4LEZ3 155 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 SELENOHQ8IZQ5 122 aaKnown RBP9.67□□□□□ -0.86
ACTN1-207ENST00000553290 TMEM116Q8NCL8 245 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 OR52E5Q8NH55 327 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 ZNF414Q96IQ9 312 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 GGTLC1Q9BX51 225 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 RETNQ9HD89 108 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 CACFD1Q9UGQ2 172 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 KCNIP3Q9Y2W7 256 aa9.67□□□□□ -0.86
ACTN1-207ENST00000553290 TRAV14DV4A0A0A6YYC5 116 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 CHEK1O14757 476 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 Q6ZRM9 215 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 LHFPL5Q8TAF8 219 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 FAM110AQ9BQ89 295 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 GINS3Q9BRX5 216 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 RHPN1-AS1Q9BWJ2 59 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 TMEM56-RWDD3S4R434 201 aa9.66□□□□□ -0.86
ACTN1-207ENST00000553290 SCGB2A1O75556 95 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 TMEM50AO95807 157 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 CD5P06127 495 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 BMI1P35226 326 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 HTR2BP41595 481 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 BSXQ3C1V8 233 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 TMEM268Q5VZI3 342 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms