RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 GPR146Q96CH1 333 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 PLEKHA3Q9HB20 300 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 TECRQ9NZ01 308 aaKnown RBP14.52□□□□□ -0.09
PTCH1-227ENST00000553256 OR2T8A6NH00 312 aa14.51□□□□□ -0.09
PTCH1-227ENST00000553256 RNASE2P10153 161 aaKnown RBP14.51□□□□□ -0.09
PTCH1-227ENST00000553256 S100A5P33763 92 aa14.51□□□□□ -0.09
PTCH1-227ENST00000553256 ELLP55199 621 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-227ENST00000553256 SPSB3Q6PJ21 355 aa14.51□□□□□ -0.09
PTCH1-227ENST00000553256 PLET1Q6UQ28 207 aa14.51□□□□□ -0.09
PTCH1-227ENST00000553256 ASCL2Q99929 193 aa14.51□□□□□ -0.09
PTCH1-227ENST00000553256 PRR13Q9NZ81 148 aa14.51□□□□□ -0.09
PTCH1-227ENST00000553256 IGHV3-35A0A0C4DH35 117 aa14.5□□□□□ -0.09
PTCH1-227ENST00000553256 MT-CO2P00403 227 aa14.5□□□□□ -0.09
PTCH1-227ENST00000553256 BAK1Q16611 211 aa14.5□□□□□ -0.09
PTCH1-227ENST00000553256 NMSQ5H8A3 153 aa14.5□□□□□ -0.09
PTCH1-227ENST00000553256 LINC00322Q6ZN03 302 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-227ENST00000553256 TOMM5Q8N4H5 51 aa14.5□□□□□ -0.09
PTCH1-227ENST00000553256 UXS1Q8NBZ7 420 aa14.5□□□□□ -0.09
PTCH1-227ENST00000553256 MCUBQ9NWR8 336 aa14.5□□□□□ -0.09
PTCH1-227ENST00000553256 ERHP84090 104 aaKnown RBP14.49□□□□□ -0.09
PTCH1-227ENST00000553256 TMEM268Q5VZI3 342 aa14.49□□□□□ -0.09
PTCH1-227ENST00000553256 TMEM61Q8N0U2 210 aa14.49□□□□□ -0.09
PTCH1-227ENST00000553256 TMEM170AQ8WVE7 144 aa14.49□□□□□ -0.09
PTCH1-227ENST00000553256 RRNAD1Q96FB5 475 aaKnown RBP14.49□□□□□ -0.09
PTCH1-227ENST00000553256 SCGB3A2Q96PL1 93 aa14.49□□□□□ -0.09
PTCH1-227ENST00000553256 TXN2Q99757 166 aa14.49□□□□□ -0.09
PTCH1-227ENST00000553256 ZNF320A2RRD8 509 aa14.48□□□□□ -0.09
PTCH1-227ENST00000553256 NDUFA4O00483 81 aa14.48□□□□□ -0.09
PTCH1-227ENST00000553256 AP3S2P59780 193 aa14.48□□□□□ -0.09
PTCH1-227ENST00000553256 SPCS3P61009 180 aa14.48□□□□□ -0.09
PTCH1-227ENST00000553256 SGPP2Q8IWX5 399 aa14.48□□□□□ -0.09
PTCH1-227ENST00000553256 SLC35G3Q8N808 338 aa14.48□□□□□ -0.09
PTCH1-227ENST00000553256 MARC2Q969Z3 335 aa14.48□□□□□ -0.09
PTCH1-227ENST00000553256 WDR89Q96FK6 387 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-227ENST00000553256 FNDC4Q9H6D8 234 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-227ENST00000553256 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-227ENST00000553256 MRPL36Q9P0J6 103 aaKnown RBP14.48□□□□□ -0.09
PTCH1-227ENST00000553256 MRPL27Q9P0M9 148 aaKnown RBP14.48□□□□□ -0.09
PTCH1-227ENST00000553256 CACNG5Q9UF02 275 aa14.48□□□□□ -0.09
PTCH1-227ENST00000553256 A0A0B4J2A0 478 aa14.47□□□□□ -0.09
PTCH1-227ENST00000553256 CD7P09564 240 aa14.47□□□□□ -0.09
PTCH1-227ENST00000553256 MISP3Q96FF7 219 aa14.47□□□□□ -0.09
PTCH1-227ENST00000553256 OR10C1Q96KK4 312 aa14.47□□□□□ -0.09
PTCH1-227ENST00000553256 TM2D3Q9BRN9 247 aa14.47□□□□□ -0.09
PTCH1-227ENST00000553256 SHPKQ9UHJ6 478 aa14.47□□□□□ -0.09
PTCH1-227ENST00000553256 K7EMT4 169 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 IFNA17P01571 189 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 IGHV3-48P01763 117 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 FAUP35544 74 aaKnown RBP14.46□□□□□ -0.09
PTCH1-227ENST00000553256 MFAP4P55083 255 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 SPANXN2Q5MJ10 180 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 LYZL2Q7Z4W2 148 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 LRTM2Q8N967 370 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 SLC25A21Q9BQT8 299 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-227ENST00000553256 PALMDQ9NP74 551 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 NDUFA13Q9P0J0 144 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 UFC1Q9Y3C8 167 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 SELENOKQ9Y6D0 94 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 U3KQK5 164 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 RYR3Q15413 4870 aa14.46□□□□□ -0.09
PTCH1-227ENST00000553256 PITX3O75364 302 aa14.45□□□□□ -0.1
PTCH1-227ENST00000553256 AKR1C4P17516 323 aa14.45□□□□□ -0.1
PTCH1-227ENST00000553256 BTCP35070 178 aa14.45□□□□□ -0.1
PTCH1-227ENST00000553256 MLANAQ16655 118 aa14.45□□□□□ -0.1
PTCH1-227ENST00000553256 ZNF57Q68EA5 555 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-227ENST00000553256 BTNL8Q6UX41 500 aa14.45□□□□□ -0.1
PTCH1-227ENST00000553256 DYNLRB2Q8TF09 96 aa14.45□□□□□ -0.1
PTCH1-227ENST00000553256 DAZ1Q9NQZ3 744 aaKnown RBP14.45□□□□□ -0.1
PTCH1-227ENST00000553256 KCNIP3Q9Y2W7 256 aa14.45□□□□□ -0.1
PTCH1-227ENST00000553256 NBEAL2Q6ZNJ1 2754 aa14.45□□□□□ -0.1
PTCH1-227ENST00000553256 STARD9Q9P2P6 4700 aa14.44□□□□□ -0.1
PTCH1-227ENST00000553256 C15orf62A8K5M9 175 aa14.44□□□□□ -0.1
PTCH1-227ENST00000553256 ANKRD55Q3KP44 614 aa14.44□□□□□ -0.1
PTCH1-227ENST00000553256 Q56UQ5 140 aa14.44□□□□□ -0.1
PTCH1-227ENST00000553256 TMEM128Q5BJH2 165 aa14.44□□□□□ -0.1
PTCH1-227ENST00000553256 NEURL2Q9BR09 285 aa14.44□□□□□ -0.1
PTCH1-227ENST00000553256 GAR1Q9NY12 217 aaKnown RBP14.44□□□□□ -0.1
PTCH1-227ENST00000553256 HSPB7Q9UBY9 170 aa14.44□□□□□ -0.1
PTCH1-227ENST00000553256 TRAV25A0A0B4J276 109 aa14.43□□□□□ -0.1
PTCH1-227ENST00000553256 SNCAP37840 140 aa14.43□□□□□ -0.1
PTCH1-227ENST00000553256 HOXA1P49639 335 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-227ENST00000553256 C2orf83Q53S99 150 aa14.43□□□□□ -0.1
PTCH1-227ENST00000553256 UBAC2Q8NBM4 344 aa14.43□□□□□ -0.1
PTCH1-227ENST00000553256 WWC2-AS2Q96NR7 200 aa14.43□□□□□ -0.1
PTCH1-227ENST00000553256 WFDC10AQ9H1F0 79 aa14.43□□□□□ -0.1
PTCH1-227ENST00000553256 DYNC2H1Q8NCM8 4307 aaKnown RBP14.42□□□□□ -0.1
PTCH1-227ENST00000553256 IGHV3OR16-8A0A075B7F1 116 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 CORTO00230 105 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 TMEM50AO95807 157 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 SULT1A3P0DMM9 295 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 SULT1A4P0DMN0 295 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 CCR6P51684 374 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 CD81P60033 236 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 GTSCR1Q86UQ5 136 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 LGI3Q8N145 548 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 RNASE11Q8TAA1 199 aaKnown RBP14.42□□□□□ -0.1
PTCH1-227ENST00000553256 PINX1Q96BK5 328 aaKnown RBP14.42□□□□□ -0.1
PTCH1-227ENST00000553256 PDCD10Q9BUL8 212 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 ZFAND3Q9H8U3 227 aa14.42□□□□□ -0.1
PTCH1-227ENST00000553256 CSMD3Q7Z407 3707 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms