RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 RELBQ01201 579 aa10.16□□□□□ -0.78
HDAC7-230ENST00000552960 VAMP3Q15836 100 aa10.16□□□□□ -0.78
HDAC7-230ENST00000552960 IBA57Q5T440 356 aaKnown RBP10.16□□□□□ -0.78
HDAC7-230ENST00000552960 C11orf53Q8IXP5 236 aa10.16□□□□□ -0.78
HDAC7-230ENST00000552960 OR4C5Q8NGB2 326 aa10.16□□□□□ -0.78
HDAC7-230ENST00000552960 ZNF331Q9NQX6 463 aaPredicted RBP10.16□□□□□ -0.78
HDAC7-230ENST00000552960 SELENOKQ9Y6D0 94 aa10.16□□□□□ -0.78
HDAC7-230ENST00000552960 CRYABP02511 175 aaKnown RBP10.15□□□□□ -0.78
HDAC7-230ENST00000552960 PRDX2P32119 198 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 Q0VG73 95 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 OR2Z1Q8NG97 314 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 GMPPAQ96IJ6 420 aaPredicted RBP10.15□□□□□ -0.78
HDAC7-230ENST00000552960 KCNS1Q96KK3 526 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 SGK494Q96LW2 274 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 VPS25Q9BRG1 176 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 IL19Q9UHD0 177 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 TIMM8BQ9Y5J9 83 aaPredicted RBP10.15□□□□□ -0.78
HDAC7-230ENST00000552960 TRAV17A0A0B4J275 112 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 ZNF324O75467 553 aaPredicted RBP10.15□□□□□ -0.78
HDAC7-230ENST00000552960 HSBP1O75506 76 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 USF1P22415 310 aaPredicted RBP10.15□□□□□ -0.78
HDAC7-230ENST00000552960 IGHV1-2P23083 117 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 GPR6P46095 362 aaPredicted RBP10.15□□□□□ -0.78
HDAC7-230ENST00000552960 CAMPP49913 170 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 ANKRD39Q53RE8 183 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 IGF2-ASQ6U949 168 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 CD177Q8N6Q3 437 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 ST6GALNAC6Q969X2 333 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 C1orf159Q96HA4 380 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 NABP2Q9BQ15 211 aa10.15□□□□□ -0.78
HDAC7-230ENST00000552960 RALYQ9UKM9 306 aaKnown RBP10.15□□□□□ -0.78
HDAC7-230ENST00000552960 TRGV10A0A0A0MS01 117 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 IQCF6A8MYZ5 107 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 RBX1P62877 108 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 MORN2Q502X0 79 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 TCTEX1D1Q8N7M0 179 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 ITPR1Q14643 2758 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 M0QZ24 198 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 BMPR1BO00238 502 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 IGHV3-48P01763 117 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 APCSP02743 223 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 IGLC2P0DOY2 106 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 IGLC3P0DOY3 106 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 CX3CL1P78423 397 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 FAM201AQ5SY85 155 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 TMEM136Q6ZRR5 245 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 LYG1Q8N1E2 194 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 SFXN3Q9BWM7 321 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 CXXC4Q9H2H0 198 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 TP73-AS1Q9UF72 201 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 ADH4P08319 380 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 GABRA6Q16445 453 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 WDR73Q6P4I2 378 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 RNASEKQ6P5S7 137 aaKnown RBP10.14□□□□□ -0.79
HDAC7-230ENST00000552960 FAM168AQ92567 244 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 ALKBH7Q9BT30 221 aaPredicted RBP10.14□□□□□ -0.79
HDAC7-230ENST00000552960 SSBP4Q9BWG4 385 aaPredicted RBP10.14□□□□□ -0.79
HDAC7-230ENST00000552960 ZNF355PQ9NSJ1 428 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 CDC42EP3Q9UKI2 254 aa10.14□□□□□ -0.79
HDAC7-230ENST00000552960 NAV3Q8IVL0 2385 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 LRBAP50851 2863 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 CEACAM4O75871 244 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 IGHG3P01860 377 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 ESDP10768 282 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 MFAP2P55001 183 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 TMEM249Q2WGJ8 235 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 STUMQ69YW2 141 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 RBMXL3Q8N7X1 1067 aaKnown RBP10.13□□□□□ -0.79
HDAC7-230ENST00000552960 DKK4Q9UBT3 224 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 SLC45A2Q9UMX9 530 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 RPH3ALQ9UNE2 315 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 C9JCJ5 164 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 NHLH1Q02575 133 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 OR4A47Q6IF82 309 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 C1orf229Q6ZS94 237 aaPredicted RBP10.13□□□□□ -0.79
HDAC7-230ENST00000552960 SEM1Q6ZVN7 128 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 Q8N976 141 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 DEFB108BQ8NET1 73 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 TSKUQ8WUA8 353 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 CLEC7AQ9BXN2 247 aa10.13□□□□□ -0.79
HDAC7-230ENST00000552960 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
HDAC7-230ENST00000552960 C15orf65H3BRN8 121 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 KIR2DL2P43627 348 aaPredicted RBP10.12□□□□□ -0.79
HDAC7-230ENST00000552960 SLAQ13239 276 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 SAPCD1Q5SSQ6 148 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 HES4Q9HCC6 221 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 CACNA1AO00555 2505 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 TRAV9-1A0A075B6T8 112 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 PRSS46E5RG02 174 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 M0R2Z0 102 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 MT-ND6P03923 174 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 ZADH2Q8N4Q0 377 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 WDR31Q8NA23 367 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 DYSFO75923 2080 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 H0Y8G0 127 aa10.12□□□□□ -0.79
HDAC7-230ENST00000552960 AMY1AP04745 511 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms