RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 PARP12Q9H0J9 701 aaKnown RBP6.65□□□□□ -1.35
TMEM116-217ENST00000552801 Q9N2K0 584 aa6.65□□□□□ -1.35
TMEM116-217ENST00000552801 CYTL1Q9NRR1 136 aa6.65□□□□□ -1.35
TMEM116-217ENST00000552801 C19orf73Q9NVV2 129 aa6.65□□□□□ -1.35
TMEM116-217ENST00000552801 GAR1Q9NY12 217 aaKnown RBP6.65□□□□□ -1.35
TMEM116-217ENST00000552801 HSF4Q9ULV5 492 aa6.65□□□□□ -1.35
TMEM116-217ENST00000552801 CARHSP1Q9Y2V2 147 aaKnown RBP6.65□□□□□ -1.35
TMEM116-217ENST00000552801 MSGN1A6NI15 193 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 H0YIZ8 118 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 ATP5G2Q06055 141 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 BTN1A1Q13410 526 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 ARFRP1Q13795 201 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 KLF5Q13887 457 aaPredicted RBP6.64□□□□□ -1.35
TMEM116-217ENST00000552801 FAM209BQ5JX69 171 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 FAM74A1Q5RGS3 127 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 IL34Q6ZMJ4 242 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 Q8N1Y9 231 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 CLRN3Q8NCR9 226 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 OR2K2Q8NGT1 345 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 OR5H2Q8NGV7 314 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 MARCH1Q8TCQ1 289 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 MARC2Q969Z3 335 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 ARHGAP5-AS1Q96IT6 56 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 RNF126Q9BV68 326 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 PECRQ9BY49 303 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 PLEKHA3Q9HB20 300 aa6.64□□□□□ -1.35
TMEM116-217ENST00000552801 RYR3Q15413 4870 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 TMEM218A2RU14 115 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 FAM223BA6NKX1 122 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 ATG12O94817 140 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 PMP2P02689 132 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 OR9G9P0C7N8 305 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 RHOGP84095 191 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 DEFA5Q01523 94 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 ANKRD55Q3KP44 614 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 ZNF343Q6P1L6 599 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 FAM223AQ8IWN6 122 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 BAP18Q8IXM2 172 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.63□□□□□ -1.35
TMEM116-217ENST00000552801 BPIFCQ8NFQ6 507 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 RNF141Q8WVD5 230 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 SAT2Q96F10 170 aaPredicted RBP6.63□□□□□ -1.35
TMEM116-217ENST00000552801 RRNAD1Q96FB5 475 aaKnown RBP6.63□□□□□ -1.35
TMEM116-217ENST00000552801 C2orf50Q96LR7 162 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 SPIN2AQ99865 258 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 SPIN2BQ9BPZ2 258 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 RTBDNQ9BSG5 229 aaPredicted RBP6.63□□□□□ -1.35
TMEM116-217ENST00000552801 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
TMEM116-217ENST00000552801 TAAR5O14804 337 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 CTSDP07339 412 aaPredicted RBP6.62□□□□□ -1.35
TMEM116-217ENST00000552801 CSN3P07498 182 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 PGAM2P15259 253 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 AKR1C4P17516 323 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 ADCYAP1P18509 176 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 ATF4P18848 351 aaPredicted RBP6.62□□□□□ -1.35
TMEM116-217ENST00000552801 DTYMKP23919 212 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 LINC00205P59089 165 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 EIF5AP63241 154 aaKnown RBP6.62□□□□□ -1.35
TMEM116-217ENST00000552801 FLI1Q01543 452 aaPredicted RBP6.62□□□□□ -1.35
TMEM116-217ENST00000552801 PJVKQ0ZLH3 352 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 LRRC37A5PQ49AS3 106 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 TMEM268Q5VZI3 342 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 ATRAIDQ6UW56 229 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 SLC16A13Q7RTY0 426 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 WFDC3Q8IUB2 231 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 SVBPQ8N300 66 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 TEX45Q8NA69 505 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 OR1S2Q8NGQ3 325 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 SRSF12Q8WXF0 261 aaKnown RBP6.62□□□□□ -1.35
TMEM116-217ENST00000552801 SEC22AQ96IW7 307 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 CYYR1Q96J86 154 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 SMIM8Q96KF7 97 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 NKX6-2Q9C056 277 aaPredicted RBP6.62□□□□□ -1.35
TMEM116-217ENST00000552801 SLC5A7Q9GZV3 580 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 SIGLEC8Q9NYZ4 499 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 PRELID3BQ9Y3B1 194 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 STAB2Q8WWQ8 2551 aa6.62□□□□□ -1.35
TMEM116-217ENST00000552801 C5orf51A6NDU8 294 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 H3BS24 57 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 TSPAN4O14817 238 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 BRI3O95415 125 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 APOC3P02656 99 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 UBE2KP61086 200 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 PRSS8Q16651 343 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 TMEM177Q53S58 311 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 EIF5AL1Q6IS14 154 aaKnown RBP6.61□□□□□ -1.35
TMEM116-217ENST00000552801 KCTD9Q7L273 389 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 MMD2Q8IY49 270 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 LRTM2Q8N967 370 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 NECAP1Q8NC96 275 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 OSR1Q8TAX0 266 aaPredicted RBP6.61□□□□□ -1.35
TMEM116-217ENST00000552801 FAM110AQ9BQ89 295 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 SRD5A3Q9H8P0 318 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 RETNQ9HD89 108 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 TNCP24821 2201 aa6.61□□□□□ -1.35
TMEM116-217ENST00000552801 ZNF320A2RRD8 509 aa6.6□□□□□ -1.35
TMEM116-217ENST00000552801 CRYM-AS1A6NIL9 109 aa6.6□□□□□ -1.35
TMEM116-217ENST00000552801 FAM74A7A6NL05 159 aa6.6□□□□□ -1.35
TMEM116-217ENST00000552801 FAM25EA8MYX2 175 aa6.6□□□□□ -1.35
TMEM116-217ENST00000552801 OR11H12B2RN74 326 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms