RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 STAG3L4Q8TBR4 150 aa4.38□□□□□ -1.71
VPS29-210ENST00000552130 SFT2D1Q8WV19 159 aa4.38□□□□□ -1.71
VPS29-210ENST00000552130 MGLLQ99685 303 aa4.38□□□□□ -1.71
VPS29-210ENST00000552130 CHCHD7Q9BUK0 85 aa4.38□□□□□ -1.71
VPS29-210ENST00000552130 C1QTNF6Q9BXI9 259 aa4.38□□□□□ -1.71
VPS29-210ENST00000552130 DEFB126Q9BYW3 111 aa4.38□□□□□ -1.71
VPS29-210ENST00000552130 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
VPS29-210ENST00000552130 CELA1Q9UNI1 258 aa4.38□□□□□ -1.71
VPS29-210ENST00000552130 RNF11Q9Y3C5 154 aa4.38□□□□□ -1.71
VPS29-210ENST00000552130 SOX21Q9Y651 276 aaPredicted RBP4.38□□□□□ -1.71
VPS29-210ENST00000552130 CAMSAP2Q08AD1 1489 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 ARHGEF11O15085 1522 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 NUP210Q8TEM1 1887 aaPredicted RBP4.37□□□□□ -1.71
VPS29-210ENST00000552130 TRBV7-6A0A0J9YX20 115 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 A0A1B0GVX0 72 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 ODAMA1E959 279 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 BPY2O14599 106 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 ZNF324O75467 553 aaPredicted RBP4.37□□□□□ -1.71
VPS29-210ENST00000552130 CST7O76096 145 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 NCR2O95944 276 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 CFC1BP0CG36 223 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 AKAIN1P0CW23 69 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 HLA-EP13747 358 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 GUCA1AP43080 201 aaPredicted RBP4.37□□□□□ -1.71
VPS29-210ENST00000552130 GNG4P50150 75 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 Q1RN00 199 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 NCMAPQ5T1S8 102 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 LINC00305Q7Z4B0 112 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 IFT20Q8IY31 132 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 C3orf22Q8N5N4 141 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 C14orf178Q8N769 122 aaPredicted RBP4.37□□□□□ -1.71
VPS29-210ENST00000552130 LINC01006Q8NI28 216 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 C1orf147Q96MC9 270 aaPredicted RBP4.37□□□□□ -1.71
VPS29-210ENST00000552130 DERL1Q9BUN8 251 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 FUT9Q9Y231 359 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 PHLPP1O60346 1717 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 CARMIL3Q8ND23 1372 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 RAPGEF2Q9Y4G8 1499 aa4.37□□□□□ -1.71
VPS29-210ENST00000552130 DSCAML1Q8TD84 2053 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 TRAV30A0A087WSZ9 112 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 IGHV1-58A0A0C4DH39 117 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 IFITM5A6NNB3 132 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 BUB1B-PAK6H3BSN5 160 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 NAPSAO96009 420 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 FABP2P12104 132 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 S100A4P26447 101 aaKnown RBP4.36□□□□□ -1.71
VPS29-210ENST00000552130 CSN1S1P47710 185 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 EIF2B2P49770 351 aaKnown RBP4.36□□□□□ -1.71
VPS29-210ENST00000552130 ZNF678Q5SXM1 525 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 NR2C2APQ86WQ0 139 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 OR5A2Q8NGI9 324 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 PP6455Q8WZ26 134 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 TMEM158Q8WZ71 300 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 MAGOHBQ96A72 148 aaKnown RBP4.36□□□□□ -1.71
VPS29-210ENST00000552130 OPRPNQ99935 248 aaPredicted RBP4.36□□□□□ -1.71
VPS29-210ENST00000552130 TBL1YQ9BQ87 522 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 PLA2G12AQ9BZM1 189 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 TMEM133Q9H2Q1 129 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 SDF2L1Q9HCN8 221 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 IL36BQ9NZH7 164 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 BOKQ9UMX3 212 aaPredicted RBP4.36□□□□□ -1.71
VPS29-210ENST00000552130 KLK5Q9Y337 293 aaPredicted RBP4.36□□□□□ -1.71
VPS29-210ENST00000552130 TMEM2Q9UHN6 1383 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 SPATA31E1Q6ZUB1 1445 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 BCL9LQ86UU0 1499 aa4.36□□□□□ -1.71
VPS29-210ENST00000552130 ADGBQ8N7X0 1667 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 DOCK4Q8N1I0 1966 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 A0A1W2PPR1 153 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 ZNF670-ZNF695F2Z2N8 137 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 P0C879 139 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 PSMB8P28062 276 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 RPL22P35268 128 aaKnown RBP4.35□□□□□ -1.71
VPS29-210ENST00000552130 AMTNQ6UX39 209 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 ZNF329Q86UD4 541 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 CEND1Q8N111 149 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 ITLN2Q8WWU7 325 aaPredicted RBP4.35□□□□□ -1.71
VPS29-210ENST00000552130 C16orf74Q96GX8 76 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 NAA38Q9BRA0 125 aaKnown RBP4.35□□□□□ -1.71
VPS29-210ENST00000552130 MDFICQ9P1T7 246 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 ARHGAP31Q2M1Z3 1444 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 CEP170Q5SW79 1584 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 TTC37Q6PGP7 1564 aa4.35□□□□□ -1.71
VPS29-210ENST00000552130 DICER1Q9UPY3 1922 aaKnown RBP4.34□□□□□ -1.71
VPS29-210ENST00000552130 IGHV3-21A0A0B4J1V1 117 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 A0A0D9SEW6 157 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 SPAARA0A1B0GVQ0 90 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 TMEM256-PLSCR3K7ERE1 68 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 K7ERS5 55 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 SNAPC5O75971 98 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 TGFBR1P36897 503 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 SRP14P37108 136 aaKnown RBP4.34□□□□□ -1.71
VPS29-210ENST00000552130 CDK6Q00534 326 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 LGALS9BQ3B8N2 356 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 LGALS9CQ6DKI2 356 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 TRAPPC6BQ86SZ2 158 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 C10orf126Q8N4M7 172 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 TEX29Q8N6K0 151 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 OR4C12Q96R67 309 aa4.34□□□□□ -1.71
VPS29-210ENST00000552130 ZNF835Q9Y2P0 537 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms