RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 GBGT1Q8N5D6 347 aa15.9■□□□□ 0.14
SMARCC2-210ENST00000550519 CD5P06127 495 aa15.89■□□□□ 0.13
SMARCC2-210ENST00000550519 TSPAN5P62079 268 aa15.89■□□□□ 0.13
SMARCC2-210ENST00000550519 TCF24Q7RTU0 167 aa15.89■□□□□ 0.13
SMARCC2-210ENST00000550519 OR11H2Q8NH07 326 aa15.89■□□□□ 0.13
SMARCC2-210ENST00000550519 MFFQ9GZY8 342 aa15.89■□□□□ 0.13
SMARCC2-210ENST00000550519 VSIRQ9H7M9 311 aa15.89■□□□□ 0.13
SMARCC2-210ENST00000550519 DNAH10Q8IVF4 4471 aa15.89■□□□□ 0.13
SMARCC2-210ENST00000550519 GNG7O60262 68 aa15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 UCP3P55916 312 aa15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 NANOS2P60321 138 aaKnown RBP15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 PAFAH1B2P68402 229 aa15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 TOMM20LQ6UXN7 152 aa15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 C11orf45Q8TAV5 145 aa15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 MRGPRFQ96AM1 343 aa15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 PINX1Q96BK5 328 aaKnown RBP15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 GINS3Q9BRX5 216 aa15.88■□□□□ 0.13
SMARCC2-210ENST00000550519 ERHP84090 104 aaKnown RBP15.87■□□□□ 0.13
SMARCC2-210ENST00000550519 LILRB2Q8N423 598 aa15.87■□□□□ 0.13
SMARCC2-210ENST00000550519 ST8SIA2Q92186 375 aa15.87■□□□□ 0.13
SMARCC2-210ENST00000550519 YIPF6Q96EC8 236 aa15.87■□□□□ 0.13
SMARCC2-210ENST00000550519 KRTAP17-1Q9BYP8 105 aa15.87■□□□□ 0.13
SMARCC2-210ENST00000550519 APOHP02749 345 aaPredicted RBP15.86■□□□□ 0.13
SMARCC2-210ENST00000550519 EIF4EP06730 217 aaKnown RBP15.86■□□□□ 0.13
SMARCC2-210ENST00000550519 LSM3P62310 102 aaKnown RBP15.86■□□□□ 0.13
SMARCC2-210ENST00000550519 RBMS2Q15434 407 aaKnown RBP15.86■□□□□ 0.13
SMARCC2-210ENST00000550519 SCPEP1Q9HB40 452 aa15.86■□□□□ 0.13
SMARCC2-210ENST00000550519 ST8SIA3O43173 380 aa15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 DFFBO76075 338 aa15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 CA1P00915 261 aaPredicted RBP15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 IFNA4P05014 189 aa15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 NPBWR1P48145 328 aa15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 DUSP18Q8NEJ0 188 aa15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 MS4A6AQ9H2W1 248 aa15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 ZFAND3Q9H8U3 227 aa15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 FBXL17Q9UF56 701 aa15.85■□□□□ 0.13
SMARCC2-210ENST00000550519 TRAV2A0A0B4J234 112 aa15.84■□□□□ 0.13
SMARCC2-210ENST00000550519 INS-IGF2F8WCM5 200 aa15.84■□□□□ 0.13
SMARCC2-210ENST00000550519 DEFB131AP59861 70 aa15.84■□□□□ 0.13
SMARCC2-210ENST00000550519 IZUMO4Q1ZYL8 232 aa15.84■□□□□ 0.13
SMARCC2-210ENST00000550519 PVRIGQ6DKI7 326 aa15.84■□□□□ 0.13
SMARCC2-210ENST00000550519 ZNF600Q6ZNG1 722 aa15.84■□□□□ 0.13
SMARCC2-210ENST00000550519 PUS1Q9Y606 427 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMARCC2-210ENST00000550519 SMIM31A0A1B0GVY4 71 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 DNASE2O00115 360 aaPredicted RBP15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 TMEM50AO95807 157 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 APOA1P02647 267 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 RCVRNP35243 200 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 TMEM187Q14656 261 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 SPINK9Q5DT21 86 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 LEMD1Q68G75 181 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 FAM24BQ8N5W8 94 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 COMMD3Q9UBI1 195 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 VPS13DQ5THJ4 4388 aa15.83■□□□□ 0.12
SMARCC2-210ENST00000550519 HERC2O95714 4834 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 IGHV3-66A0A0C4DH42 116 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 A0A1B0GU03 582 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 DEFB4AO15263 64 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 IGKV1-5P01602 117 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 P0C879 139 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 RND3P61587 244 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 SNX29P2Q8IUI4 249 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 C2CD4CQ8TF44 421 aa15.82■□□□□ 0.12
SMARCC2-210ENST00000550519 A0A0B4J293 547 aa15.81■□□□□ 0.12
SMARCC2-210ENST00000550519 SNCAP37840 140 aa15.81■□□□□ 0.12
SMARCC2-210ENST00000550519 TCTAP57738 103 aa15.81■□□□□ 0.12
SMARCC2-210ENST00000550519 PRR20EP86478 221 aa15.81■□□□□ 0.12
SMARCC2-210ENST00000550519 PRR20CP86479 221 aa15.81■□□□□ 0.12
SMARCC2-210ENST00000550519 PRR20DP86480 221 aa15.81■□□□□ 0.12
SMARCC2-210ENST00000550519 PRR20BP86481 221 aa15.81■□□□□ 0.12
SMARCC2-210ENST00000550519 PRR20AP86496 221 aa15.81■□□□□ 0.12
SMARCC2-210ENST00000550519 RPL11P62913 178 aaKnown RBP15.8■□□□□ 0.12
SMARCC2-210ENST00000550519 Q8NAQ8 132 aa15.8■□□□□ 0.12
SMARCC2-210ENST00000550519 ZNF486Q96H40 463 aaPredicted RBP15.8■□□□□ 0.12
SMARCC2-210ENST00000550519 TMEM231Q9H6L2 316 aa15.8■□□□□ 0.12
SMARCC2-210ENST00000550519 M0QYG6 137 aa15.79■□□□□ 0.12
SMARCC2-210ENST00000550519 GIG44P09565 113 aaPredicted RBP15.79■□□□□ 0.12
SMARCC2-210ENST00000550519 RNASE2P10153 161 aaKnown RBP15.79■□□□□ 0.12
SMARCC2-210ENST00000550519 LHFPL1Q86WI0 220 aa15.79■□□□□ 0.12
SMARCC2-210ENST00000550519 STHQ8IWL8 128 aa15.79■□□□□ 0.12
SMARCC2-210ENST00000550519 SLC35G3Q8N808 338 aa15.79■□□□□ 0.12
SMARCC2-210ENST00000550519 TP53RKQ96S44 253 aa15.79■□□□□ 0.12
SMARCC2-210ENST00000550519 HRH4Q9H3N8 390 aa15.79■□□□□ 0.12
SMARCC2-210ENST00000550519 CORTO00230 105 aa15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 ELK1P19419 428 aa15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 PI3P19957 117 aa15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 NPPCP23582 126 aa15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 FNDC4Q9H6D8 234 aaPredicted RBP15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 VCX3AQ9NNX9 186 aa15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 MRPL36Q9P0J6 103 aaKnown RBP15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 RABAC1Q9UI14 185 aa15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 APLNQ9ULZ1 77 aa15.78■□□□□ 0.12
SMARCC2-210ENST00000550519 A0A087WXM4 84 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 A0A1W2PS18 150 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 K7EQG2 157 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 CLN5O75503 358 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 IFNA17P01571 189 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 PGAM2P15259 253 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 CRYBB3P26998 211 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 AKR1C2P52895 323 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms