RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 C11orf1Q9H5F2 150 aa10.07□□□□□ -0.8
RAB5C-206ENST00000550406 RCL1Q9Y2P8 373 aaKnown RBP10.07□□□□□ -0.8
RAB5C-206ENST00000550406 A0A0G2JLM5 398 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 C15orf62A8K5M9 175 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 NUDT19A8MXV4 375 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 F8W735 103 aaPredicted RBP10.06□□□□□ -0.8
RAB5C-206ENST00000550406 WRBO00258 174 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 MED6O75586 246 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 TRBV12-3P01733 135 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 IGHV3-23P01764 117 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 CXCL3P19876 107 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 SNCAP37840 140 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 HTR2BP41595 481 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 FCN2Q15485 313 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 OR11H7Q8NGC8 314 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 CCDC140Q96MF4 163 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 HIPK2Q9H2X6 1198 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 MGAT4CQ9UBM8 478 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 WNK1Q9H4A3 2382 aa10.06□□□□□ -0.8
RAB5C-206ENST00000550406 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 A0A087WW49 117 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.05□□□□□ -0.8
RAB5C-206ENST00000550406 ANKRD34BA5PLL1 514 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 K7EPK0 472 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 SCGB1D2O95969 90 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 SUB1P53999 127 aaKnown RBP eCLIP10.05□□□□□ -0.8
RAB5C-206ENST00000550406 EXOSC2Q13868 293 aaKnown RBP10.05□□□□□ -0.8
RAB5C-206ENST00000550406 SLC24A4Q8NFF2 622 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 ZNF502Q8TBZ5 544 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 VN1R17PQ8TDU5 208 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 SCARB1Q8WTV0 552 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 MISP3Q96FF7 219 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 SMIM8Q96KF7 97 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 OR4C12Q96R67 309 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 NMES1Q9C002 83 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-206ENST00000550406 MRPL36Q9P0J6 103 aaKnown RBP10.05□□□□□ -0.8
RAB5C-206ENST00000550406 U3KQ87 197 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 TRRAPQ9Y4A5 3859 aa10.05□□□□□ -0.8
RAB5C-206ENST00000550406 M0QZ24 198 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 CCL24O00175 119 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 SSSCA1O60232 199 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 MT-CO2P00403 227 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 IFNA10P01566 189 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 IGHV3-48P01763 117 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 HSPB1P04792 205 aaKnown RBP10.04□□□□□ -0.8
RAB5C-206ENST00000550406 NPY1RP25929 384 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 RAB32Q13637 225 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 FHL3Q13643 280 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 OR1N2Q8NGR9 330 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 ZNF414Q96IQ9 312 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 MED28Q9H204 178 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 THYN1Q9P016 225 aa10.04□□□□□ -0.8
RAB5C-206ENST00000550406 PEF1Q9UBV8 284 aaKnown RBP10.04□□□□□ -0.8
RAB5C-206ENST00000550406 LSM5Q9Y4Y9 91 aaKnown RBP10.04□□□□□ -0.8
RAB5C-206ENST00000550406 PMS2P5A8MQ11 134 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 PPP5D1E7EU14 171 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 H0YIZ8 118 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 BMPR1BO00238 502 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 CYB5BO43169 146 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 MYCNOSP40205 109 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 RRAS2P62070 204 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-206ENST00000550406 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 Q6ZNX1 250 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 OR4F17Q8NGA8 305 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 EEF1AKMT3Q96AZ1 226 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 PINX1Q96BK5 328 aaKnown RBP10.03□□□□□ -0.8
RAB5C-206ENST00000550406 CXorf58Q96LI9 332 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 CIB3Q96Q77 187 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-206ENST00000550406 OR4F4Q96R69 305 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 PSENENQ9NZ42 101 aa10.03□□□□□ -0.8
RAB5C-206ENST00000550406 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 PRSS46E5RG02 174 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 H3BP45 60 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 CCNKO75909 580 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 CLEC3BP05452 202 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 SLURP1P55000 103 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 ATP5IP56385 69 aaPredicted RBP10.02□□□□□ -0.81
RAB5C-206ENST00000550406 SPANXN5Q5MJ07 72 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 LINC00482Q8N8I6 264 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 RAB40CQ96S21 281 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 VWFP04275 2813 aa10.02□□□□□ -0.81
RAB5C-206ENST00000550406 LINC01619G3V211 115 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 TAS2R30P59541 319 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 CD69Q07108 199 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 ZNF616Q08AN1 781 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 PRR31Q5SQ13 230 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 TMEM14EPQ6UXP3 125 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 HAPLN4Q86UW8 402 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 RNASEH2CQ8TDP1 164 aaKnown RBP10.01□□□□□ -0.81
RAB5C-206ENST00000550406 CHAC2Q8WUX2 184 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 CHRDL1Q9BU40 450 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 RNF126Q9BV68 326 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 RANGRFQ9HD47 186 aaPredicted RBP10.01□□□□□ -0.81
RAB5C-206ENST00000550406 ZC4H2Q9NQZ6 224 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 OR5AC2Q9NZP5 309 aa10.01□□□□□ -0.81
RAB5C-206ENST00000550406 OR2T8A6NH00 312 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms