RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 MUC4Q99102 2169 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 GPR31O00270 319 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 CTSDP07339 412 aaPredicted RBP5.62□□□□□ -1.51
NEK3-201ENST00000550331 CTSGP08311 255 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 RPA2P15927 270 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 RPL35AP18077 110 aaKnown RBP5.62□□□□□ -1.51
NEK3-201ENST00000550331 NAT1P18440 290 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 FCGR2BP31994 310 aaPredicted RBP5.62□□□□□ -1.51
NEK3-201ENST00000550331 G6PCP35575 357 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 LPAR6P43657 344 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 Q56UQ5 140 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 UBE2NLQ5JXB2 153 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 UBAC2Q8NBM4 344 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 ZNF114Q8NC26 417 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 TSPAN14Q8NG11 270 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 OR5H2Q8NGV7 314 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 OR6F1Q8NGZ6 308 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 OR1P1Q8NH06 330 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 OR10C1Q96KK4 312 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 TXN2Q99757 166 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 ZNF2Q9BSG1 426 aaPredicted RBP5.62□□□□□ -1.51
NEK3-201ENST00000550331 HINT2Q9BX68 163 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 TMEM14BQ9NUH8 114 aa5.62□□□□□ -1.51
NEK3-201ENST00000550331 DYNC1H1Q14204 4646 aaKnown RBP5.62□□□□□ -1.51
NEK3-201ENST00000550331 IGHV3OR16-8A0A075B7F1 116 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 IGHV7-4-1A0A0J9YVY3 117 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 MEIS3P1A6NDR6 274 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 C15orf61A6NNL5 157 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 MPTX1A8MV57 137 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 CHEK1O14757 476 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 NUPL2O15504 423 aaKnown RBP5.61□□□□□ -1.51
NEK3-201ENST00000550331 ZNF207O43670 478 aaKnown RBP5.61□□□□□ -1.51
NEK3-201ENST00000550331 CD5P06127 495 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 S100GP29377 79 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 RFX2P48378 723 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 NEDD8Q15843 81 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 KCTD21Q4G0X4 260 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 TMEM69Q5SWH9 247 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 LGALS9CQ6DKI2 356 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 LPCAT3Q6P1A2 487 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 LILRB2Q8N423 598 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 TMEM116Q8NCL8 245 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 ZNF414Q96IQ9 312 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 RNF2Q99496 336 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 RHPN1-AS1Q9BWJ2 59 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 MFFQ9GZY8 342 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 FXYD6Q9H0Q3 95 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 CSTL1Q9H114 145 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 NSG2Q9Y328 171 aa5.61□□□□□ -1.51
NEK3-201ENST00000550331 PKHD1P08F94 4074 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 TRAV14DV4A0A0A6YYC5 116 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 IGHV3-21A0A0B4J1V1 117 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 I3L2K1 104 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 DEDDO75618 318 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 YIF1AO95070 293 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 ATP6V1G2O95670 118 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 PMP2P02689 132 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 PRSS3P35030 304 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 MFAP4P55083 255 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 TAS2R20P59543 309 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 PAFAH1B2P68402 229 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 PRCDQ00LT1 54 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 FAM90A2PQ658T7 463 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 APRG1Q8IVJ8 170 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 PHLDA1Q8WV24 401 aaPredicted RBP5.6□□□□□ -1.51
NEK3-201ENST00000550331 SLC25A46Q96AG3 418 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 CMTM3Q96MX0 182 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 RARRES2Q99969 163 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 NXF2Q9GZY0 626 aaKnown RBP5.6□□□□□ -1.51
NEK3-201ENST00000550331 C11orf68Q9H3H3 251 aaKnown RBP5.6□□□□□ -1.51
NEK3-201ENST00000550331 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
NEK3-201ENST00000550331 FAT2Q9NYQ8 4349 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 TRAV2A0A0B4J234 112 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 DFFBO76075 338 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 MT-CO2P00403 227 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 HRH1P35367 487 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 TFPI2P48307 235 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 UCP3P55916 312 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 PHLDA2Q53GA4 152 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 H2BFWTQ7Z2G1 175 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 TBC1D26Q86UD7 250 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 LYSMD2Q8IV50 215 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 SAMD12Q8N8I0 201 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 OR4A16Q8NH70 328 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 GPX8Q8TED1 209 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 SEC22AQ96IW7 307 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 GINS3Q9BRX5 216 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 SCPEP1Q9HB40 452 aa5.59□□□□□ -1.51
NEK3-201ENST00000550331 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 DNAH17Q9UFH2 4485 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 IGHV3-49A0A0A0MS15 119 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 INS-IGF2F8WCM5 200 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 GNG7O60262 68 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 IGKV1-39P01597 117 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 IGKV1D-39P04432 117 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 EIF4EP06730 217 aaKnown RBP5.58□□□□□ -1.52
NEK3-201ENST00000550331 HLA-DMAP28067 261 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 RCVRNP35243 200 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 RPS19P39019 145 aaKnown RBP5.58□□□□□ -1.52
NEK3-201ENST00000550331 NPBWR1P48145 328 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms