RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SSMEM1Q8WWF3 244 aa6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 ARPC1AQ92747 370 aa6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 P2RX4Q99571 388 aa6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 SRSF8Q9BRL6 282 aaKnown RBP6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 ZNF471Q9BX82 626 aaPredicted RBP6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 TNFRSF19Q9NS68 423 aa6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 PITPNC1Q9UKF7 332 aa6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 PAIP2BQ9ULR5 123 aaKnown RBP6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 DMRT1Q9Y5R6 373 aa6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 U3KQ87 197 aa6.38□□□□□ -1.39
DEPDC4-207ENST00000549249 NSD1Q96L73 2696 aaPredicted RBP6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 HOXA3O43365 443 aaPredicted RBP6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 CNIH1O95406 144 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 CTRB1P17538 263 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 SRP14P37108 136 aaKnown RBP6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 HTR2BP41595 481 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 ERHP84090 104 aaKnown RBP6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 SLC38A11Q08AI6 406 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 C19orf54Q5BKX5 351 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 PVRIGQ6DKI7 326 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 CTRB2Q6GPI1 263 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 ETV3LQ6ZN32 361 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 SLC51BQ86UW2 128 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 STX12Q86Y82 276 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 TEX29Q8N6K0 151 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 ZNF114Q8NC26 417 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 OR1S2Q8NGQ3 325 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 OR5R1Q8NH85 324 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 SPATA3Q8NHX4 192 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 STOML3Q8TAV4 291 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 ABHD5Q8WTS1 349 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 ST8SIA2Q92186 375 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 ATP5SQ99766 215 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 ARV1Q9H2C2 271 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 SLA2Q9H6Q3 261 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 VPREB3Q9UKI3 123 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 F11RQ9Y624 299 aaKnown RBP6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 ATRQ13535 2644 aa6.37□□□□□ -1.39
DEPDC4-207ENST00000549249 FN1P02751 2386 aaKnown RBP6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 INAFM1C9JVW0 142 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 TAAR5O14804 337 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 IGHG2P01859 326 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 IFNA4P05014 189 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 HNF1AP20823 631 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 C4BPBP20851 252 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 CRIP2P52943 208 aaPredicted RBP6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 RAB11AP62491 216 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 BLCAPP62952 87 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 UBA52P62987 128 aaKnown RBP6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 HBG1P69891 147 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 HBG2P69892 147 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 RPP30P78346 268 aaKnown RBP6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 DLK1P80370 383 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 MLANAQ16655 118 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 VWC2Q2TAL6 325 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 LILRB2Q8N423 598 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 LFNGQ8NES3 379 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 OR10P1Q8NGE3 313 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 SGMS2Q8NHU3 365 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 DUX5Q96PT3 197 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 TMEM147Q9BVK8 224 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 GON7Q9BXV9 100 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 FNDC4Q9H6D8 234 aaPredicted RBP6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 ESM1Q9NQ30 184 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 PARP11Q9NR21 331 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 RFNGQ9Y644 331 aa6.36□□□□□ -1.39
DEPDC4-207ENST00000549249 COL6A5A8TX70 2615 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 STAB1Q9NY15 2570 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 UBE2L5PA0A1B0GUS4 154 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 BTBD17A6NE02 478 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 DNAJC9-AS1A6NH13 148 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 NPIPB5A8MRT5 1133 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 G3V318 75 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 M0QZK8 103 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 RGS13O14921 159 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 CRLF1O75462 422 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 CRYGCP07315 174 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 MDKP21741 143 aaPredicted RBP6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 SNCAP37840 140 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 RUNX1Q01196 453 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 EXOSC2Q13868 293 aaKnown RBP6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 TEX261Q6UWH6 196 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 HSD17B13Q7Z5P4 300 aaPredicted RBP6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 PRIMA1Q86XR5 153 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 MRPL41Q8IXM3 137 aaKnown RBP6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 TTC9CQ8N5M4 171 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 UBAC2Q8NBM4 344 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 OR1P1Q8NH06 330 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 PINX1Q96BK5 328 aaKnown RBP6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 GINS3Q9BRX5 216 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 PARD6GQ9BYG4 376 aaPredicted RBP6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 WNT10AQ9GZT5 417 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 DNHD1Q96M86 4753 aa6.35□□□□□ -1.39
DEPDC4-207ENST00000549249 BORCS7-ASMTA0A0B4J1R7 106 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 SOX15O60248 233 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 DFFBO76075 338 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 JTBO76095 146 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 SCAF4O95104 1147 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms