RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 KLF3P57682 345 aaPredicted RBP11.52□□□□□ -0.56
RAPGEF3-218ENST00000548919 ZNF439Q8NDP4 499 aa11.52□□□□□ -0.56
RAPGEF3-218ENST00000548919 CORO2AQ92828 525 aa11.52□□□□□ -0.56
RAPGEF3-218ENST00000548919 DCAF16Q9NXF7 216 aa11.52□□□□□ -0.56
RAPGEF3-218ENST00000548919 ZNF586Q9NXT0 402 aa11.52□□□□□ -0.56
RAPGEF3-218ENST00000548919 PRNDQ9UKY0 176 aa11.52□□□□□ -0.56
RAPGEF3-218ENST00000548919 PPIAL4AQ9Y536 164 aa11.52□□□□□ -0.56
RAPGEF3-218ENST00000548919 ROS1P08922 2347 aa11.52□□□□□ -0.56
RAPGEF3-218ENST00000548919 MAP1BP46821 2468 aaKnown RBP11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 TRBV9A0A0B4J1U6 114 aa11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 M0QZK8 103 aa11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 BMPR1BO00238 502 aa11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 UPK2O00526 184 aa11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 SSBP2P81877 361 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 PRR31Q5SQ13 230 aa11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 OR2T6Q8NHC8 308 aa11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 SARAFQ96BY9 339 aa11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 SPOCK3Q9BQ16 436 aa11.52□□□□□ -0.57
RAPGEF3-218ENST00000548919 SEM1Q6ZVN7 128 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 LPAR2Q9HBW0 351 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 OSTCQ9NRP0 149 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 CDC42EP3Q9UKI2 254 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 CEP250Q9BV73 2442 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 PLA2G2CQ5R387 149 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 KCNS1Q96KK3 526 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 IGF2BP2-AS1Q96M15 143 aa11.51□□□□□ -0.57
RAPGEF3-218ENST00000548919 ISLRO14498 428 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 DLEU1O43261 78 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 OR5G3P0C626 314 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 SAA1P0DJI8 122 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 WDR73Q6P4I2 378 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 RPRMLQ8N4K4 120 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 SLC25A33Q9BSK2 321 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 WNT10AQ9GZT5 417 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 E7EUB6 86 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 ITGB1BP1O14713 200 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 AMY1AP04745 511 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 PYYP10082 97 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 RNASE2P10153 161 aaKnown RBP11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 NTF3P20783 257 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 PPOXP50336 477 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 SLAQ13239 276 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 GAFA1Q96PS6 74 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 PLXNB1O43157 2135 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 TRAV34A0A0B4J273 112 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 SMIM27A0A1W2PRY6 76 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 MT-ND6P03923 174 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 POU2AF1Q16633 256 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 SPATA45Q537H7 98 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 ATOH7Q8N100 152 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 ADTRPQ96IZ2 230 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 SLC25A2Q9BXI2 301 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 GOLT1BQ9Y3E0 138 aa11.5□□□□□ -0.57
RAPGEF3-218ENST00000548919 TACC2O95359 2948 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 FNDC10F2Z333 226 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 C8orf88P0DMB2 117 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 REG1BP48304 166 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 TAS2R45P59539 299 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 MMDQ15546 238 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 OR10J3Q5JRS4 329 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 SLC35E1Q96K37 410 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 RNF2Q99496 336 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 ZNF355PQ9NSJ1 428 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 ZNF257Q9Y2Q1 563 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 ARL2-SNX15V9GYD0 113 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 C3orf79P0CE67 100 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 CHRNB4P30926 498 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 RTL8BQ17RB0 113 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 STUMQ69YW2 141 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 ZNF474Q6S9Z5 364 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 C1orf174Q8IYL3 243 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 FAM167A-AS1Q96KT0 104 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 RNF7Q9UBF6 113 aa11.49□□□□□ -0.57
RAPGEF3-218ENST00000548919 EP300Q09472 2414 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 APCSP02743 223 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 USF1P22415 310 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 C2orf83Q53S99 150 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 C22orf34Q6ZV56 151 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 NIT1Q86X76 327 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 OR4B1Q8NGF8 309 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 TSKUQ8WUA8 353 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 DYSFO75923 2080 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 TRAV17A0A0B4J275 112 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 A0A1W2PRE2 83 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 CTRLP40313 264 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 CD69Q07108 199 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 MAJINQ3KP22 176 aa11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 SLC25A48Q6ZT89 311 aaKnown RBP11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 MRPL20Q9BYC9 149 aaKnown RBP11.48□□□□□ -0.57
RAPGEF3-218ENST00000548919 ATMQ13315 3056 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 PLAUP00749 431 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 GLRXP35754 106 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 RPL19P84098 196 aaKnown RBP11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 TNFAIP6P98066 277 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 LCN12Q6JVE5 192 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms