RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TMEM50AO95807 157 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 NPY1RP25929 384 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 ATP5IP56385 69 aaPredicted RBP16.33■□□□□ 0.2
CACNB3-210ENST00000548874 RUNX1Q01196 453 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 ATP5G2Q06055 141 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 NSUN5P1Q3KNT7 163 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 KLHL30-AS1Q8NEE0 82 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 WDR89Q96FK6 387 aaPredicted RBP16.33■□□□□ 0.2
CACNB3-210ENST00000548874 RAB40CQ96S21 281 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 K7EIM0 57 aa16.32■□□□□ 0.2
CACNB3-210ENST00000548874 IFNA10P01566 189 aa16.32■□□□□ 0.2
CACNB3-210ENST00000548874 IGHV3-11P01762 117 aa16.32■□□□□ 0.2
CACNB3-210ENST00000548874 LGALS1P09382 135 aaKnown RBP16.32■□□□□ 0.2
CACNB3-210ENST00000548874 PAX9P55771 341 aa16.32■□□□□ 0.2
CACNB3-210ENST00000548874 RAB32Q13637 225 aa16.32■□□□□ 0.2
CACNB3-210ENST00000548874 ZNF343Q6P1L6 599 aa16.32■□□□□ 0.2
CACNB3-210ENST00000548874 SMIM8Q96KF7 97 aa16.32■□□□□ 0.2
CACNB3-210ENST00000548874 C11orf1Q9H5F2 150 aa16.32■□□□□ 0.2
CACNB3-210ENST00000548874 MFSD2BA6NFX1 497 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 C15orf62A8K5M9 175 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 NUDT19A8MXV4 375 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 I3L2K1 104 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 CORTO00230 105 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 TAS2R30P59541 319 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 EXOSC2Q13868 293 aaKnown RBP16.31■□□□□ 0.2
CACNB3-210ENST00000548874 C8orf86Q6ZUL3 223 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 NOXA1Q86UR1 476 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 VN1R17PQ8TDU5 208 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 MISP3Q96FF7 219 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 CXorf58Q96LI9 332 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 OR4C12Q96R67 309 aa16.31■□□□□ 0.2
CACNB3-210ENST00000548874 LSM5Q9Y4Y9 91 aaKnown RBP16.31■□□□□ 0.2
CACNB3-210ENST00000548874 RNASEH2CQ8TDP1 164 aaKnown RBP16.3■□□□□ 0.2
CACNB3-210ENST00000548874 OR5B12Q96R08 314 aa16.3■□□□□ 0.2
CACNB3-210ENST00000548874 MT-CO2P00403 227 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 S100A10P60903 97 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 RPP30P78346 268 aaKnown RBP16.29■□□□□ 0.2
CACNB3-210ENST00000548874 ZNF502Q8TBZ5 544 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 SCARB1Q8WTV0 552 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 PPP1R1CQ8WVI7 109 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 EEF1AKMT3Q96AZ1 226 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 CCDC140Q96MF4 163 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 FNDC4Q9H6D8 234 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-210ENST00000548874 PSENENQ9NZ42 101 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 S4R3C0 116 aa16.29■□□□□ 0.2
CACNB3-210ENST00000548874 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.28■□□□□ 0.2
CACNB3-210ENST00000548874 TRBV7-1A0A0A6YYK4 115 aa16.28■□□□□ 0.2
CACNB3-210ENST00000548874 H3BP45 60 aa16.28■□□□□ 0.2
CACNB3-210ENST00000548874 TSC22D2O75157 780 aa16.28■□□□□ 0.2
CACNB3-210ENST00000548874 SPANXN5Q5MJ07 72 aa16.28■□□□□ 0.2
CACNB3-210ENST00000548874 ZNF436Q9C0F3 470 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-210ENST00000548874 STRAPQ9Y3F4 350 aaKnown RBP16.28■□□□□ 0.2
CACNB3-210ENST00000548874 IGHV3-21A0A0B4J1V1 117 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 M0QZ24 198 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 DEDDO75618 318 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 DEFB136Q30KP8 78 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 FAM209BQ5JX69 171 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 TMEM14EPQ6UXP3 125 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 ETV3LQ6ZN32 361 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 ASB13Q8WXK3 278 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 PINX1Q96BK5 328 aaKnown RBP16.27■□□□□ 0.2
CACNB3-210ENST00000548874 RAX2Q96IS3 184 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 ATP6V0BQ99437 205 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 C21orf62Q9NYP8 219 aa16.27■□□□□ 0.2
CACNB3-210ENST00000548874 ANK2Q01484 3957 aa16.27■□□□□ 0.19
CACNB3-210ENST00000548874 F8W735 103 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-210ENST00000548874 H0YIZ8 118 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 L7N2F9 121 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 TRBV12-3P01733 135 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 IGHV3-23P01764 117 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 GIPP09681 153 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-210ENST00000548874 PVALBP20472 110 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-210ENST00000548874 RAB11AP62491 216 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 VAMP2P63027 116 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 FHL3Q13643 280 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 LRRC37A5PQ49AS3 106 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 OR4F17Q8NGA8 305 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 OR4F4Q96R69 305 aa16.26■□□□□ 0.19
CACNB3-210ENST00000548874 PEF1Q9UBV8 284 aaKnown RBP16.26■□□□□ 0.19
CACNB3-210ENST00000548874 PRSS46E5RG02 174 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 MPC2O95563 127 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 HSPB1P04792 205 aaKnown RBP16.25■□□□□ 0.19
CACNB3-210ENST00000548874 IFNA4P05014 189 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 OR8U8P0C7N1 319 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 FCGR2BP31994 310 aaPredicted RBP16.25■□□□□ 0.19
CACNB3-210ENST00000548874 MYCNOSP40205 109 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 OPRK1P41145 380 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 CD69Q07108 199 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 MLANAQ16655 118 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 OR11H1Q8NG94 326 aa16.25■□□□□ 0.19
CACNB3-210ENST00000548874 IGHV4OR15-8A0A075B7B6 117 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 A0A087WW49 117 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 RPS10-NUDT3A0A1W2PQS6 291 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 ANKRD34BA5PLL1 514 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 PMS2P5A8MQ11 134 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 CCL24O00175 119 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 TSPAN15O95858 294 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 IGHV3-48P01763 117 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 CLEC19AQ6UXS0 136 aa16.24■□□□□ 0.19
CACNB3-210ENST00000548874 OR1N2Q8NGR9 330 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms