RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CORO2AQ92828 525 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 IL19Q9UHD0 177 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 JPT1Q9UK76 154 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 TLN2Q9Y4G6 2542 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 LOC102724200A0A096LPH7 203 aaPredicted RBP11.68□□□□□ -0.54
CACNB3-209ENST00000548860 DIRC3C9JPN6 131 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.68□□□□□ -0.54
CACNB3-209ENST00000548860 ERVK11-1P61568 191 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 DIAPH2-AS1Q14236 149 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 ZNF474Q6S9Z5 364 aaPredicted RBP11.68□□□□□ -0.54
CACNB3-209ENST00000548860 C11orf53Q8IXP5 236 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 LINC01560Q8TB33 94 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 MCRIP2Q9BUT9 160 aaKnown RBP11.68□□□□□ -0.54
CACNB3-209ENST00000548860 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 ZNF891A8MT65 544 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-209ENST00000548860 F2Z2F3 143 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 C16orf97H3BN30 126 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 GFRA3O60609 400 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 PFN1P07737 140 aaKnown RBP11.67□□□□□ -0.54
CACNB3-209ENST00000548860 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-209ENST00000548860 RPL8P62917 257 aaKnown RBP11.67□□□□□ -0.54
CACNB3-209ENST00000548860 MSMPQ1L6U9 139 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 C10orf113Q5VZT2 155 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 Q6ZN92 141 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 AGMATQ9BSE5 352 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 NUPR1O60356 82 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 FAM222BQ8WU58 562 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 PMCHL2Q9BQD1 86 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 PAXXQ9BUH6 204 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 ASCL3Q9NQ33 180 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 PPIAL4EA0A075B759 164 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 PPIAL4DF5H284 164 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 CHEK1O14757 476 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 PPIAL4FP0DN26 164 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.54
CACNB3-209ENST00000548860 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
CACNB3-209ENST00000548860 HCFC1P51610 2035 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 KBTBD11-OT1A0A1B0GTJ5 212 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 AHRRA9YTQ3 701 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 COTL1Q14019 142 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 PMCHL1Q16048 86 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 ARSJQ5FYB0 599 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-209ENST00000548860 REC114Q7Z4M0 266 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 M0R143 59 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 Q6ZS49 121 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 ARL6IP6Q8N6S5 226 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 ZNF714Q96N38 554 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 NOTCH2Q04721 2471 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 TRAV1-1A0A0B4J248 108 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 M0QZ24 198 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 RPEQ96AT9 228 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 INSIG2Q9Y5U4 225 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 KIAA1549Q9HCM3 1950 aa11.66□□□□□ -0.54
CACNB3-209ENST00000548860 J3KRW8 73 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 GLRXP35754 106 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 BSPH1Q075Z2 132 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 NEU1Q99519 415 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 GAL3ST2Q9H3Q3 398 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 GNB4Q9HAV0 340 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-209ENST00000548860 SRRM5B3KS81 715 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 CD40P25942 277 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 RELBQ01201 579 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 RNF151Q2KHN1 245 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 LCN12Q6JVE5 192 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 TEX38Q6PEX7 206 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 PDPNQ86YL7 162 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 PGLYRP4Q96LB8 373 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 M0R2Z0 102 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 IGHV1-46P01743 117 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 SRP14P37108 136 aaKnown RBP11.65□□□□□ -0.54
CACNB3-209ENST00000548860 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-209ENST00000548860 VMA21Q3ZAQ7 101 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
CACNB3-209ENST00000548860 IGKV3-7A0A075B6H7 116 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 EREGO14944 169 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 SNAI2O43623 268 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 HNRNPA3P51991 378 aaKnown RBP11.64□□□□□ -0.55
CACNB3-209ENST00000548860 TMEM170AQ8WVE7 144 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 IFI27L2Q9H2X8 130 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 PRDM13Q9H4Q3 707 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 C11orf1Q9H5F2 150 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 TMEM167BQ9NRX6 74 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 A0A1B0GW64 132 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 BRWD1-AS2P59051 145 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 ARF6P62330 175 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 JOSD1Q15040 202 aaPredicted RBP11.64□□□□□ -0.55
CACNB3-209ENST00000548860 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 Q6ZSR3 168 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 KDF1Q8NAX2 398 aaPredicted RBP11.64□□□□□ -0.55
CACNB3-209ENST00000548860 ABHD17AQ96GS6 310 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 TIMM9Q9Y5J7 89 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 FAM87AP0C7U9 286 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 BPIFB3P59826 476 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms