RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 NDUFA11Q86Y39 141 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF709Q8N972 641 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 OR8S1Q8NH09 359 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 ZFAND1Q8TCF1 268 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 H1FXQ92522 213 aaKnown RBP2.29□□□□□ -2.04
PTCH1-216ENST00000548379 SPTSSAQ969W0 71 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 SLC25A46Q96AG3 418 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 KCNS1Q96KK3 526 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 OR10C1Q96KK4 312 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 RSG1Q9BU20 258 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 ADAT1Q9BUB4 502 aaKnown RBP2.29□□□□□ -2.04
PTCH1-216ENST00000548379 NSRP1Q9H0G5 558 aaKnown RBP2.29□□□□□ -2.04
PTCH1-216ENST00000548379 RERGLQ9H628 205 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 EXOSC4Q9NPD3 245 aaKnown RBP2.29□□□□□ -2.04
PTCH1-216ENST00000548379 ATPIF1Q9UII2 106 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 SIGLEC9Q9Y336 463 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF407Q9C0G0 2248 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 AKAP6Q13023 2319 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 USF3Q68DE3 2245 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 FAM240AA0A1B0GVK7 77 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 GGT3PA6NGU5 568 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 EFCAB9A8MZ26 197 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 F5H5K5 113 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 C3orf84H3BNL1 204 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 H3BUX3 64 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 M0R1W7 72 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 SULT1C2O00338 296 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 BHLHE40O14503 412 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 OR5F1O95221 314 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 GYPAP02724 150 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 IFI30P13284 250 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 GPX2P18283 190 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 CRABP1P29762 137 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 TALDO1P37837 337 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 OR12D2P58182 307 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 TAS2R46P59540 309 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 LSM6P62312 80 aaKnown RBP2.28□□□□□ -2.04
PTCH1-216ENST00000548379 ENDOGQ14249 297 aaKnown RBP2.28□□□□□ -2.04
PTCH1-216ENST00000548379 FLOT2Q14254 428 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 SNCBQ16143 134 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 LY6EQ16553 131 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 LRRC75BQ2VPJ9 315 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 COX19Q49B96 90 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 FAM201AQ5SY85 155 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 SSX7Q7RTT5 188 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 MRPL52Q86TS9 123 aaKnown RBP2.28□□□□□ -2.04
PTCH1-216ENST00000548379 OSR2Q8N2R0 312 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 OR4M1Q8NGD0 313 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 OR51D1Q8NGF3 324 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 OR4X2Q8NGF9 303 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 OR9Q1Q8NGQ5 310 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 PFN4Q8NHR9 129 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 C10orf82Q8WW14 230 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 C12orf43Q96C57 262 aaKnown RBP2.28□□□□□ -2.04
PTCH1-216ENST00000548379 RDH12Q96NR8 316 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 PITX2Q99697 317 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 SULT4A1Q9BR01 284 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 C20orf27Q9GZN8 174 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 METTL8Q9H825 291 aaKnown RBP2.28□□□□□ -2.04
PTCH1-216ENST00000548379 IFT46Q9NQC8 304 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 CCDC167Q9P0B6 97 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 KAAG1Q9UBP8 84 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 VAX2Q9UIW0 290 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 RPUSD1Q9UJJ7 312 aaKnown RBP2.28□□□□□ -2.04
PTCH1-216ENST00000548379 S4R3C0 116 aa2.28□□□□□ -2.04
PTCH1-216ENST00000548379 SONP18583 2426 aaKnown RBP2.28□□□□□ -2.04
PTCH1-216ENST00000548379 ZANQ9Y493 2812 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 SNRNP200O75643 2136 aaKnown RBP2.27□□□□□ -2.05
PTCH1-216ENST00000548379 TRAV27A0A087WT01 109 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 A0A0A6YYH2 397 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 IGKV1D-43A0A0B4J1Z2 117 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 TRAV8-4A0A0B4J246 113 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 TCRBV4S1A1TA0A5B7 111 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 A6NJ64 397 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF850A8MQ14 1090 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 NDUFC2-KCTD14E9PQ53 114 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 H7C1C5 153 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 CDIPTO14735 213 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 RER1O15258 196 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 SHOX2O60902 331 aaPredicted RBP2.27□□□□□ -2.05
PTCH1-216ENST00000548379 NDUFB2O95178 105 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 TRBV12-3P01733 135 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 P01737 135 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 CD28P10747 220 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 CFL1P23528 166 aaKnown RBP2.27□□□□□ -2.05
PTCH1-216ENST00000548379 ERFP50548 548 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 LCN6P62502 163 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 IL5RAQ01344 420 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 TEX30Q5JUR7 227 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 CLEC12AQ5QGZ9 265 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 TEX36Q5VZQ5 186 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 THOC7Q6I9Y2 204 aaKnown RBP2.27□□□□□ -2.05
PTCH1-216ENST00000548379 SLC7A5P1Q8MH63 180 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 TMEM256Q8N2U0 113 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 C10orf111Q8N326 155 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF565Q8N9K5 539 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 SPANXA2-OT1Q8N9U9 137 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 UBAC2Q8NBM4 344 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 LY6G5BQ8NDX9 201 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms