RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 THOC7Q6I9Y2 204 aaKnown RBP8.75□□□□□ -1.01
TRAFD1-205ENST00000548277 HSD17B13Q7Z5P4 300 aaPredicted RBP8.75□□□□□ -1.01
TRAFD1-205ENST00000548277 GATAD1Q8WUU5 269 aa8.75□□□□□ -1.01
TRAFD1-205ENST00000548277 LSM10Q969L4 123 aaKnown RBP8.75□□□□□ -1.01
TRAFD1-205ENST00000548277 MFFQ9GZY8 342 aa8.75□□□□□ -1.01
TRAFD1-205ENST00000548277 SCPEP1Q9HB40 452 aa8.75□□□□□ -1.01
TRAFD1-205ENST00000548277 TRAV14DV4A0A0A6YYC5 116 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 DBX1A6NMT0 343 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 C15orf62A8K5M9 175 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 DNASE2O00115 360 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 S100GP29377 79 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 RORCP51449 518 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 CMC4P56277 68 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 TMEM187Q14656 261 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 LPCAT3Q6P1A2 487 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 TCF24Q7RTU0 167 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 TBC1D26Q86UD7 250 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 CADM3Q8N126 398 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 PINX1Q96BK5 328 aaKnown RBP8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 ZNF414Q96IQ9 312 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 NAA50Q9GZZ1 169 aaKnown RBP8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 APLNQ9ULZ1 77 aa8.74□□□□□ -1.01
TRAFD1-205ENST00000548277 FAM25AB3EWG3 89 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 FAM25CB3EWG5 89 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 FAM25GB3EWG6 89 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 M0QYG6 137 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 APOHP02749 345 aaPredicted RBP8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 RCVRNP35243 200 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 MFAP4P55083 255 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 DEFB131AP59861 70 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 PAFAH1B2P68402 229 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 RELQ04864 619 aaPredicted RBP8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 RNASE12Q5GAN4 147 aaKnown RBP8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 MZT2AQ6P582 158 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 LILRB2Q8N423 598 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 TMEM56Q96MV1 263 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 FKBP11Q9NYL4 201 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 PRNDQ9UKY0 176 aa8.73□□□□□ -1.01
TRAFD1-205ENST00000548277 ST8SIA3O43173 380 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 GNG7O60262 68 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 DFFBO76075 338 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 MT-CO2P00403 227 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 IGKV1-39P01597 117 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 IGKV1D-39P04432 117 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 UCP3P55916 312 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 CTF1Q16619 201 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 SPINK9Q5DT21 86 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 FAM90A2PQ658T7 463 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 FAM24BQ8N5W8 94 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 ST8SIA2Q92186 375 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 SEC22AQ96IW7 307 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 TSC22D3Q99576 134 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 C11orf68Q9H3H3 251 aaKnown RBP8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 FAM212BQ9NTI7 297 aaPredicted RBP8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 TMEM14BQ9NUH8 114 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 KLK11Q9UBX7 282 aa8.72□□□□□ -1.01
TRAFD1-205ENST00000548277 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.01
TRAFD1-205ENST00000548277 C15orf61A6NNL5 157 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 SMIM18P0DKX4 95 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 ZNF182P17025 639 aaPredicted RBP8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 GPR107Q5VW38 600 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 STHQ8IWL8 128 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 OR52I2Q8NH67 350 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 OR4A16Q8NH70 328 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 AP3S1Q92572 193 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 NXF2Q9GZY0 626 aaKnown RBP8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 MS4A6AQ9H2W1 248 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 RABAC1Q9UI14 185 aa8.71□□□□□ -1.02
TRAFD1-205ENST00000548277 VPS13DQ5THJ4 4388 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 I3L2K1 104 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 GABARAPO95166 117 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 RBMY1A1P0DJD3 496 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 RBMY1CP0DJD4 496 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 PGAM2P15259 253 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 PI3P19957 117 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 HLA-DMBP28068 263 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 RBMY1FQ15415 496 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 RNASE10Q5GAN6 216 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 TOMM20LQ6UXN7 152 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 ZNF767PQ75MW2 155 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 OR1P1Q8NH06 330 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 MRGPRFQ96AM1 343 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 OR10C1Q96KK4 312 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 ATP6V0BQ99437 205 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 CLEC5AQ9NY25 188 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 EXTL2Q9UBQ6 330 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 HECTD4Q9Y4D8 3996 aa8.7□□□□□ -1.02
TRAFD1-205ENST00000548277 PCLOQ9Y6V0 5065 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 IGHV4-28A0A0C4DH34 117 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 M0R2N4 97 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 CD3DP04234 171 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 HSPE1P61604 102 aaKnown RBP8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 IZUMO4Q1ZYL8 232 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 ABHD1Q96SE0 405 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 GINS3Q9BRX5 216 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 MTFP1Q9UDX5 166 aa8.69□□□□□ -1.02
TRAFD1-205ENST00000548277 PUS1Q9Y606 427 aaKnown RBP eCLIP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms