RNA–Protein interactions for RNA: ENST00000547983.5

PXN-214, Transcript of paxillin, humanhuman

TSL 5

Gene PXN, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-214ENST00000547983 MISP3Q96FF7 219 aa13.13□□□□□ -0.31
PXN-214ENST00000547983 TSC22D3Q99576 134 aa13.13□□□□□ -0.31
PXN-214ENST00000547983 RHPN1-AS1Q9BWJ2 59 aa13.13□□□□□ -0.31
PXN-214ENST00000547983 IGHV7-4-1A0A0J9YVY3 117 aa13.12□□□□□ -0.31
PXN-214ENST00000547983 C15orf61A6NNL5 157 aa13.12□□□□□ -0.31
PXN-214ENST00000547983 CA1P00915 261 aaPredicted RBP13.12□□□□□ -0.31
PXN-214ENST00000547983 HLA-DMAP28067 261 aa13.12□□□□□ -0.31
PXN-214ENST00000547983 HRH1P35367 487 aa13.12□□□□□ -0.31
PXN-214ENST00000547983 TMEM14BQ9NUH8 114 aa13.12□□□□□ -0.31
PXN-214ENST00000547983 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
PXN-214ENST00000547983 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
PXN-214ENST00000547983 NAT1P18440 290 aa13.11□□□□□ -0.31
PXN-214ENST00000547983 S100GP29377 79 aa13.11□□□□□ -0.31
PXN-214ENST00000547983 PRSS3P35030 304 aa13.11□□□□□ -0.31
PXN-214ENST00000547983 MFAP4P55083 255 aa13.11□□□□□ -0.31
PXN-214ENST00000547983 TSPAN5P62079 268 aa13.11□□□□□ -0.31
PXN-214ENST00000547983 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
PXN-214ENST00000547983 FAM90A2PQ658T7 463 aa13.11□□□□□ -0.31
PXN-214ENST00000547983 KRTAP4-5Q9BYR2 181 aa13.11□□□□□ -0.31
PXN-214ENST00000547983 I3L2K1 104 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 IGHV3-48P01763 117 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 RPS19P39019 145 aaKnown RBP13.1□□□□□ -0.31
PXN-214ENST00000547983 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
PXN-214ENST00000547983 TCTAP57738 103 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 LSM3P62310 102 aaKnown RBP13.1□□□□□ -0.31
PXN-214ENST00000547983 LEMD1Q68G75 181 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 H2BFWTQ7Z2G1 175 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 LYSMD2Q8IV50 215 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 PINX1Q96BK5 328 aaKnown RBP13.1□□□□□ -0.31
PXN-214ENST00000547983 CMTM3Q96MX0 182 aa13.1□□□□□ -0.31
PXN-214ENST00000547983 TRAV14DV4A0A0A6YYC5 116 aa13.09□□□□□ -0.31
PXN-214ENST00000547983 MT-CO2P00403 227 aa13.09□□□□□ -0.31
PXN-214ENST00000547983 TMEM187Q14656 261 aa13.09□□□□□ -0.31
PXN-214ENST00000547983 TBC1D26Q86UD7 250 aa13.09□□□□□ -0.31
PXN-214ENST00000547983 Q8NAQ8 132 aa13.09□□□□□ -0.31
PXN-214ENST00000547983 OR10C1Q96KK4 312 aa13.09□□□□□ -0.31
PXN-214ENST00000547983 TXN2Q99757 166 aa13.09□□□□□ -0.31
PXN-214ENST00000547983 NXF2Q9GZY0 626 aaKnown RBP13.09□□□□□ -0.31
PXN-214ENST00000547983 HSPG2P98160 4391 aa13.08□□□□□ -0.32
PXN-214ENST00000547983 GNG7O60262 68 aa13.08□□□□□ -0.32
PXN-214ENST00000547983 MED14OSP0DP75 135 aa13.08□□□□□ -0.32
PXN-214ENST00000547983 LPCAT3Q6P1A2 487 aa13.08□□□□□ -0.32
PXN-214ENST00000547983 LINC00336Q6ZUF6 198 aa13.08□□□□□ -0.32
PXN-214ENST00000547983 FAM24BQ8N5W8 94 aa13.08□□□□□ -0.32
PXN-214ENST00000547983 SEC22AQ96IW7 307 aa13.08□□□□□ -0.32
PXN-214ENST00000547983 IGKV1-39P01597 117 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 APOHP02749 345 aaPredicted RBP13.07□□□□□ -0.32
PXN-214ENST00000547983 IGKV1D-39P04432 117 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 EIF4EP06730 217 aaKnown RBP13.07□□□□□ -0.32
PXN-214ENST00000547983 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
PXN-214ENST00000547983 HLA-DMBP28068 263 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 DEFB131AP59861 70 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 PAFAH1B2P68402 229 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 PRCDQ00LT1 54 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 KCTD21Q4G0X4 260 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 Q6ZTC4 211 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 TCF24Q7RTU0 167 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 MRGPRFQ96AM1 343 aa13.07□□□□□ -0.32
PXN-214ENST00000547983 FAM212BQ9NTI7 297 aaPredicted RBP13.07□□□□□ -0.32
PXN-214ENST00000547983 IGHV4-4A0A075B6R2 117 aa13.06□□□□□ -0.32
PXN-214ENST00000547983 IGHV4-28A0A0C4DH34 117 aa13.06□□□□□ -0.32
PXN-214ENST00000547983 M0R2N4 97 aa13.06□□□□□ -0.32
PXN-214ENST00000547983 RTL8CO15255 209 aa13.06□□□□□ -0.32
PXN-214ENST00000547983 HSPE1P61604 102 aaKnown RBP13.06□□□□□ -0.32
PXN-214ENST00000547983 ERHP84090 104 aaKnown RBP13.06□□□□□ -0.32
PXN-214ENST00000547983 SPINK9Q5DT21 86 aa13.06□□□□□ -0.32
PXN-214ENST00000547983 ZNF114Q8NC26 417 aa13.06□□□□□ -0.32
PXN-214ENST00000547983 GPX8Q8TED1 209 aa13.06□□□□□ -0.32
PXN-214ENST00000547983 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
PXN-214ENST00000547983 IGHV3-66A0A0C4DH42 116 aa13.05□□□□□ -0.32
PXN-214ENST00000547983 SMIM31A0A1B0GVY4 71 aa13.05□□□□□ -0.32
PXN-214ENST00000547983 C11orf94C9JXX5 98 aa13.05□□□□□ -0.32
PXN-214ENST00000547983 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
PXN-214ENST00000547983 SNX29P2Q8IUI4 249 aa13.05□□□□□ -0.32
PXN-214ENST00000547983 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
PXN-214ENST00000547983 MS4A6AQ9H2W1 248 aa13.05□□□□□ -0.32
PXN-214ENST00000547983 COMMD3Q9UBI1 195 aa13.05□□□□□ -0.32
PXN-214ENST00000547983 ELOA3CA0A087WX78 387 aaPredicted RBP13.04□□□□□ -0.32
PXN-214ENST00000547983 PRSS29PA6NIE9 313 aa13.04□□□□□ -0.32
PXN-214ENST00000547983 ST8SIA3O43173 380 aa13.04□□□□□ -0.32
PXN-214ENST00000547983 RPL11P62913 178 aaKnown RBP13.04□□□□□ -0.32
PXN-214ENST00000547983 IZUMO4Q1ZYL8 232 aa13.04□□□□□ -0.32
PXN-214ENST00000547983 TOMM20LQ6UXN7 152 aa13.04□□□□□ -0.32
PXN-214ENST00000547983 DUSP18Q8NEJ0 188 aa13.04□□□□□ -0.32
PXN-214ENST00000547983 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
PXN-214ENST00000547983 SCRT1Q9BWW7 348 aa13.04□□□□□ -0.32
PXN-214ENST00000547983 HRH4Q9H3N8 390 aa13.04□□□□□ -0.32
PXN-214ENST00000547983 DFFBO76075 338 aa13.03□□□□□ -0.32
PXN-214ENST00000547983 CD5P06127 495 aa13.03□□□□□ -0.32
PXN-214ENST00000547983 NPBWR1P48145 328 aa13.03□□□□□ -0.32
PXN-214ENST00000547983 UCP3P55916 312 aa13.03□□□□□ -0.32
PXN-214ENST00000547983 ZNF767PQ75MW2 155 aa13.03□□□□□ -0.32
PXN-214ENST00000547983 SCPEP1Q9HB40 452 aa13.03□□□□□ -0.32
PXN-214ENST00000547983 PUS1Q9Y606 427 aaKnown RBP eCLIP13.03□□□□□ -0.32
PXN-214ENST00000547983 M0QYG6 137 aa13.02□□□□□ -0.33
PXN-214ENST00000547983 PGAM2P15259 253 aa13.02□□□□□ -0.33
PXN-214ENST00000547983 RCVRNP35243 200 aa13.02□□□□□ -0.33
PXN-214ENST00000547983 SNCAP37840 140 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms