RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CD3DP04234 171 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 CTSDP07339 412 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-211ENST00000547950 RPL35AP18077 110 aaKnown RBP4.99□□□□□ -1.61
SCAF11-211ENST00000547950 TFPI2P48307 235 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 MFAP4P55083 255 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 UCP3P55916 312 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 HSPE1P61604 102 aaKnown RBP4.99□□□□□ -1.61
SCAF11-211ENST00000547950 ERHP84090 104 aaKnown RBP4.99□□□□□ -1.61
SCAF11-211ENST00000547950 SPINK9Q5DT21 86 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 RNASE10Q5GAN6 216 aaKnown RBP4.99□□□□□ -1.61
SCAF11-211ENST00000547950 GPR107Q5VW38 600 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 CADM3Q8N126 398 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 OR1P1Q8NH06 330 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 OR52I2Q8NH67 350 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 SEC22AQ96IW7 307 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 ABHD1Q96SE0 405 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 SPAG8Q99932 426 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-211ENST00000547950 OVOL2Q9BRP0 275 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 NAA50Q9GZZ1 169 aaKnown RBP4.99□□□□□ -1.61
SCAF11-211ENST00000547950 EXTL2Q9UBQ6 330 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 SMPXQ9UHP9 88 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 IGHV3OR16-13A0A075B7E8 117 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 TRAV14DV4A0A0A6YYC5 116 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 IGHV3-74A0A0B4J1X5 117 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 OR4C46A6NHA9 309 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 C15orf62A8K5M9 175 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 I3L2K1 104 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 SPRY2O43597 315 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 JTBO76095 146 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 MT-CO2P00403 227 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 IFNA17P01571 189 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 ZNF182P17025 639 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-211ENST00000547950 SNCAP37840 140 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 ETV6P41212 452 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 APOC4P55056 127 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 PIGPP57054 158 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 PRCDQ00LT1 54 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 RELQ04864 619 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-211ENST00000547950 CTF1Q16619 201 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 TRIM16LQ309B1 348 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 SP6Q3SY56 376 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 APRG1Q8IVJ8 170 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 GBGT1Q8N5D6 347 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 TMEM116Q8NCL8 245 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 AP3S1Q92572 193 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 TP53RKQ96S44 253 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 RNF2Q99496 336 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 TXN2Q99757 166 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 RHPN1-AS1Q9BWJ2 59 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 FAM212BQ9NTI7 297 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-211ENST00000547950 TNCP24821 2201 aa4.98□□□□□ -1.61
SCAF11-211ENST00000547950 A0A0B4J293 547 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 IGHV3-66A0A0C4DH42 116 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 IGHV7-4-1A0A0J9YVY3 117 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 A0A0J9YWU9 116 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 C3orf85A0A1B0GTC6 90 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 CXorf65A6NEN9 183 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 CHEK1O14757 476 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 RGS5O15539 181 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 ST8SIA3O43173 380 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 GNG7O60262 68 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 IGKV1-5P01602 117 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 AKR1C2P52895 323 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 PPP5CP53041 499 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 SUB1P53999 127 aaKnown RBP eCLIP4.97□□□□□ -1.61
SCAF11-211ENST00000547950 RND3P61587 244 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 RPL11P62913 178 aaKnown RBP4.97□□□□□ -1.61
SCAF11-211ENST00000547950 PMS2P11Q13670 270 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 DEFB135Q30KP9 77 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 ODF3L2Q3SX64 289 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 SCGB2B2Q4G0G5 96 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 Q6ZWC4 215 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 LHFPL1Q86WI0 220 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 STPG3Q8N7X2 389 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 DUSP18Q8NEJ0 188 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 OR4D10Q8NGI6 311 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 TERB2Q8NHR7 220 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 RNASE11Q8TAA1 199 aaKnown RBP4.97□□□□□ -1.61
SCAF11-211ENST00000547950 ZFAND1Q8TCF1 268 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 ATP6V0BQ99437 205 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 PDCD10Q9BUL8 212 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 NXF2Q9GZY0 626 aaKnown RBP4.97□□□□□ -1.61
SCAF11-211ENST00000547950 COPZ2Q9P299 210 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 MTFP1Q9UDX5 166 aa4.97□□□□□ -1.61
SCAF11-211ENST00000547950 TEX13DA0A0J9YY54 714 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-211ENST00000547950 UBE2CO00762 179 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 CTDSP2O14595 271 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 ATG12O94817 140 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 GABARAPO95166 117 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 RAB3DO95716 219 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 APOHP02749 345 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-211ENST00000547950 SMIM18P0DKX4 95 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 TBPP20226 339 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 BMI1P35226 326 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 NPBWR1P48145 328 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 CMC4P56277 68 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-211ENST00000547950 TAS2R19P59542 299 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 PAFAH1B2P68402 229 aa4.96□□□□□ -1.62
SCAF11-211ENST00000547950 EWSR1Q01844 656 aaKnown RBP eCLIP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms