RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 CCDC190Q86UF4 302 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 SELENOHQ8IZQ5 122 aaKnown RBP11.16□□□□□ -0.62
CCDC38-205ENST00000546947 TOMM5Q8N4H5 51 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 UXS1Q8NBZ7 420 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 LHFPL5Q8TAF8 219 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 DEDD2Q8WXF8 326 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 MISP3Q96FF7 219 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 GALNT14Q96FL9 552 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 WWC2-AS2Q96NR7 200 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 TXN2Q99757 166 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
CCDC38-205ENST00000546947 KCNIP3Q9Y2W7 256 aa11.16□□□□□ -0.62
CCDC38-205ENST00000546947 IGHV3-35A0A0C4DH35 117 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 NDUFA4O00483 81 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 MT-CO2P00403 227 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 FCGR2BP31994 310 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-205ENST00000546947 SNCAP37840 140 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 AARDQ4LEZ3 155 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 TM4SF20Q53R12 229 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 SPINK9Q5DT21 86 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 ZNF57Q68EA5 555 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-205ENST00000546947 UBAC2Q8NBM4 344 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 TMEM190Q8WZ59 177 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 IL22RA2Q969J5 263 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 ENY2Q9NPA8 101 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 TMEM56-RWDD3S4R434 201 aa11.15□□□□□ -0.62
CCDC38-205ENST00000546947 CORTO00230 105 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 ETV6P41212 452 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 HOXA1P49639 335 aaPredicted RBP11.14□□□□□ -0.63
CCDC38-205ENST00000546947 SUB1P53999 127 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC38-205ENST00000546947 SPCS3P61009 180 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 RELQ04864 619 aaPredicted RBP11.14□□□□□ -0.63
CCDC38-205ENST00000546947 TMEM187Q14656 261 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 SPANXN2Q5MJ10 180 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 TMEM268Q5VZI3 342 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 Q6ZRM9 215 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 OR52E5Q8NH55 327 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 CHRDL1Q9BU40 450 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 ZMAT4Q9H898 229 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.14□□□□□ -0.63
CCDC38-205ENST00000546947 MLXQ9UH92 298 aa11.14□□□□□ -0.63
CCDC38-205ENST00000546947 DNAH7Q8WXX0 4024 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 NUPL2O15504 423 aaKnown RBP11.13□□□□□ -0.63
CCDC38-205ENST00000546947 CTSGP08311 255 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 ADMP35318 185 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 CD81P60033 236 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 GUCA2BQ16661 112 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 PVRIGQ6DKI7 326 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 BTNL8Q6UX41 500 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 PINX1Q96BK5 328 aaKnown RBP11.13□□□□□ -0.63
CCDC38-205ENST00000546947 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 WDR89Q96FK6 387 aaPredicted RBP11.13□□□□□ -0.63
CCDC38-205ENST00000546947 NEURL2Q9BR09 285 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 TUBA4BQ9H853 241 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 DAZ1Q9NQZ3 744 aaKnown RBP11.13□□□□□ -0.63
CCDC38-205ENST00000546947 CACFD1Q9UGQ2 172 aa11.13□□□□□ -0.63
CCDC38-205ENST00000546947 TRAV25A0A0B4J276 109 aa11.12□□□□□ -0.63
CCDC38-205ENST00000546947 K7EMT4 169 aa11.12□□□□□ -0.63
CCDC38-205ENST00000546947 RNASE2P10153 161 aaKnown RBP11.12□□□□□ -0.63
CCDC38-205ENST00000546947 ANXA3P12429 323 aa11.12□□□□□ -0.63
CCDC38-205ENST00000546947 AKR1C4P17516 323 aa11.12□□□□□ -0.63
CCDC38-205ENST00000546947 TMEM61Q8N0U2 210 aa11.12□□□□□ -0.63
CCDC38-205ENST00000546947 SRRQ9GZT4 340 aa11.12□□□□□ -0.63
CCDC38-205ENST00000546947 NDUFA13Q9P0J0 144 aa11.12□□□□□ -0.63
CCDC38-205ENST00000546947 CACNG5Q9UF02 275 aa11.12□□□□□ -0.63
CCDC38-205ENST00000546947 A0A0B4J2A0 478 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 PIGBOS1A0A0B4J2F0 54 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 C15orf62A8K5M9 175 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 GNG7O60262 68 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 CD7P09564 240 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 NPBWR1P48145 328 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
CCDC38-205ENST00000546947 SRPXP78539 464 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 BSXQ3C1V8 233 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 ANKRD55Q3KP44 614 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 DUSP18Q8NEJ0 188 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 SLC25A21Q9BQT8 299 aaPredicted RBP11.11□□□□□ -0.63
CCDC38-205ENST00000546947 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 C20orf24Q9BUV8 137 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 SHPKQ9UHJ6 478 aa11.11□□□□□ -0.63
CCDC38-205ENST00000546947 IGHV3-48P01763 117 aa11.1□□□□□ -0.63
CCDC38-205ENST00000546947 SULT1A3P0DMM9 295 aa11.1□□□□□ -0.63
CCDC38-205ENST00000546947 SULT1A4P0DMN0 295 aa11.1□□□□□ -0.63
CCDC38-205ENST00000546947 HTR2BP41595 481 aa11.1□□□□□ -0.63
CCDC38-205ENST00000546947 RBPMS2Q6ZRY4 209 aaKnown RBP11.1□□□□□ -0.63
CCDC38-205ENST00000546947 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
CCDC38-205ENST00000546947 LGI3Q8N145 548 aa11.1□□□□□ -0.63
CCDC38-205ENST00000546947 SELENOKQ9Y6D0 94 aa11.1□□□□□ -0.63
CCDC38-205ENST00000546947 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 SCAF4O95104 1147 aaKnown RBP11.09□□□□□ -0.63
CCDC38-205ENST00000546947 CCR6P51684 374 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 TMEM128Q5BJH2 165 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 LAMTOR1Q6IAA8 161 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms