RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 WASHC3Q9Y3C0 194 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 J3QR06 171 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 C3orf79P0CE67 100 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 OPRK1P41145 380 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 WDR82Q6UXN9 313 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 OR8B2Q96RD0 313 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 ZNF835Q9Y2P0 537 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 DSCAML1Q8TD84 2053 aa12.08□□□□□ -0.48
HOXC11-202ENST00000546378 KMT2EQ8IZD2 1858 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 PCSK5Q92824 1860 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 PTPRQQ9UMZ3 2332 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 DPRXA6NFQ7 191 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 TMPRSS2O15393 492 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 SSBP2P81877 361 aaPredicted RBP12.07□□□□□ -0.48
HOXC11-202ENST00000546378 SMIM21Q3B7S5 101 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 WFDC3Q8IUB2 231 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
HOXC11-202ENST00000546378 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 WIPI2Q9Y4P8 454 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 APOA2P02652 100 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 LINC00310P59036 64 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 ACP7Q6ZNF0 438 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 KCNIP2Q9NS61 270 aa12.07□□□□□ -0.48
HOXC11-202ENST00000546378 TET2Q6N021 2002 aaPredicted RBP12.07□□□□□ -0.48
HOXC11-202ENST00000546378 hDV102S1A0JD36 115 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.06□□□□□ -0.48
HOXC11-202ENST00000546378 MMP23AO75900 390 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 DUTP33316 252 aaKnown RBP12.06□□□□□ -0.48
HOXC11-202ENST00000546378 SLAQ13239 276 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 COL5A1-AS1Q5SY13 56 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 ZNF596Q8TC21 504 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 BCL2L2Q92843 193 aaPredicted RBP12.06□□□□□ -0.48
HOXC11-202ENST00000546378 NPVFQ9HCQ7 196 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 IGHV3OR16-8A0A075B7F1 116 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 PMS2P5A8MQ11 134 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 RAB29O14966 203 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 APCSP02743 223 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 MRPS11P82912 194 aaKnown RBP12.06□□□□□ -0.48
HOXC11-202ENST00000546378 STUMQ69YW2 141 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 CECR9P0C854 216 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 TNXAQ16473 311 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 OR4A47Q6IF82 309 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 RBMXL3Q8N7X1 1067 aaKnown RBP12.06□□□□□ -0.48
HOXC11-202ENST00000546378 TMEM178AQ8NBL3 297 aa12.06□□□□□ -0.48
HOXC11-202ENST00000546378 RNASE8Q8TDE3 154 aaKnown RBP12.06□□□□□ -0.48
HOXC11-202ENST00000546378 BEND2Q8NDZ0 799 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 PYGO2Q9BRQ0 406 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 OR51B2Q9Y5P1 312 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 TRAV8-1A0A0A6YYK1 113 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 GFRA3O60609 400 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 MT-CO2P00403 227 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 OR1B1Q8NGR6 318 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 ITLN1Q8WWA0 313 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 GMPPAQ96IJ6 420 aaPredicted RBP12.05□□□□□ -0.48
HOXC11-202ENST00000546378 SLC35E1Q96K37 410 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 TM4SF20Q53R12 229 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 LINC00173Q6ZV60 143 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 SCNM1Q9BWG6 230 aa12.05□□□□□ -0.48
HOXC11-202ENST00000546378 SAA2-SAA4A0A096LPE2 208 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 A0A1W2PS18 150 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
HOXC11-202ENST00000546378 DNPH1O43598 174 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 SAA2P0DJI9 122 aaPredicted RBP12.04□□□□□ -0.48
HOXC11-202ENST00000546378 PKIBQ9C010 78 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 LAMTOR2Q9Y2Q5 125 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 LOC389332A0A1B0GUA5 103 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 TNFSF13O75888 250 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 VENTXO95231 258 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 STAG3L2P0CL84 134 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 STAG3L3P0CL85 134 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 CEACAM8P31997 349 aaPredicted RBP12.04□□□□□ -0.48
HOXC11-202ENST00000546378 LCN2P80188 198 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 RPRMLQ8N4K4 120 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 CLEC7AQ9BXN2 247 aa12.04□□□□□ -0.48
HOXC11-202ENST00000546378 CCL3L1P16619 93 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 ZNF718Q3SXZ3 478 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 ZNF71Q9NQZ8 489 aaPredicted RBP12.03□□□□□ -0.48
HOXC11-202ENST00000546378 IGHV3-35A0A0C4DH35 117 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 TMEM210A6NLX4 147 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 COX7A2P2O60397 106 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 SLC25A5P05141 298 aaKnown RBP12.03□□□□□ -0.48
HOXC11-202ENST00000546378 GPX1P07203 203 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 LINC00869P0C866 280 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 Q8IYB0 196 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 RNF2Q99496 336 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 GGTLC3B5MD39 225 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 HYPMO75409 117 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 SELENOVP59797 346 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 UBE2G1P62253 170 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 RNPS1Q15287 305 aaKnown RBP12.03□□□□□ -0.48
HOXC11-202ENST00000546378 MORN2Q502X0 79 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms