RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 CCL2P13500 99 aa6.53□□□□□ -1.36
UBR1-202ENST00000546274 PCBD1P61457 104 aa6.53□□□□□ -1.36
UBR1-202ENST00000546274 WFDC2Q14508 124 aa6.53□□□□□ -1.36
UBR1-202ENST00000546274 ETDBQ3ZM63 59 aa6.53□□□□□ -1.36
UBR1-202ENST00000546274 PPP1R32Q7Z5V6 425 aa6.53□□□□□ -1.36
UBR1-202ENST00000546274 TPRX1Q8N7U7 411 aa6.53□□□□□ -1.36
UBR1-202ENST00000546274 RNASE7Q9H1E1 156 aaKnown RBP6.53□□□□□ -1.36
UBR1-202ENST00000546274 RALYQ9UKM9 306 aaKnown RBP6.53□□□□□ -1.36
UBR1-202ENST00000546274 BOKQ9UMX3 212 aaPredicted RBP6.53□□□□□ -1.36
UBR1-202ENST00000546274 UFC1Q9Y3C8 167 aa6.53□□□□□ -1.36
UBR1-202ENST00000546274 ZDBF2Q9HCK1 2354 aa6.53□□□□□ -1.36
UBR1-202ENST00000546274 ZNF407Q9C0G0 2248 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 C3orf80F5H4A9 247 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 H3BRM9 83 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 MT-ND6P03923 174 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 TFF3Q07654 80 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 C9orf135Q5VTT2 229 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 PEAR1Q5VY43 1037 aaPredicted RBP6.52□□□□□ -1.37
UBR1-202ENST00000546274 DOLPP1Q86YN1 238 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 RDH5Q92781 318 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 PRRG4Q9BZD6 226 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 JPT1Q9UK76 154 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 TRBV9A0A0B4J1U6 114 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 OR11H12B2RN74 326 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 HSPB6O14558 160 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 P04436 131 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 SPINK8P0C7L1 97 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 FAM87AP0C7U9 286 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 FOLR3P41439 243 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 FOXG1P55316 489 aaPredicted RBP6.52□□□□□ -1.37
UBR1-202ENST00000546274 OR11H1Q8NG94 326 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 OR11H2Q8NH07 326 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 SPAG8Q99932 426 aaPredicted RBP6.52□□□□□ -1.37
UBR1-202ENST00000546274 OR2D2Q9H210 308 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 SCRT2Q9NQ03 307 aa6.52□□□□□ -1.37
UBR1-202ENST00000546274 SPENQ96T58 3664 aaKnown RBP6.52□□□□□ -1.37
UBR1-202ENST00000546274 KBTBD11-OT1A0A1B0GTJ5 212 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 A0A1W2PPV4 95 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 HELTA6NFD8 242 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 SCGB2A1O75556 95 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 PGLYRP1O75594 196 aaPredicted RBP6.51□□□□□ -1.37
UBR1-202ENST00000546274 MT-CO3P00414 261 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 IGLV2-14P01704 120 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 INSL3P51460 131 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 VWC2Q2TAL6 325 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 LINC00696Q6ZRV3 163 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 LSM10Q969L4 123 aaKnown RBP6.51□□□□□ -1.37
UBR1-202ENST00000546274 TMEM191AQ9H0A3 160 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 KCNS2Q9ULS6 477 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 ZNF257Q9Y2Q1 563 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 ATP23Q9Y6H3 246 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 H0Y980 276 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 ATP5J2P56134 94 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 RPL31P62899 125 aaKnown RBP6.51□□□□□ -1.37
UBR1-202ENST00000546274 RPL32P62910 135 aaKnown RBP6.51□□□□□ -1.37
UBR1-202ENST00000546274 OR1L1Q8NH94 360 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 FAM110AQ9BQ89 295 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 ANAPC13Q9BS18 74 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 MS4A5Q9H3V2 200 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 TNFRSF19Q9NS68 423 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 TRAPPC2LQ9UL33 140 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 IGKV3D-15A0A087WSY6 115 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 SYS1-DBNDD2H3BUS1 97 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 SYNGR1O43759 233 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 COL8A2P25067 703 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 EDDM3BP56851 147 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 CX3CL1P78423 397 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 ASCL5Q7RTU5 278 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 ARPC1AQ92747 370 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 SPATA25Q9BR10 227 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 ZNF331Q9NQX6 463 aaPredicted RBP6.51□□□□□ -1.37
UBR1-202ENST00000546274 KCNIP2Q9NS61 270 aa6.51□□□□□ -1.37
UBR1-202ENST00000546274 TRAV9-1A0A075B6T8 112 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 A0A096LPE4 126 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 A0A1W2PPZ6 126 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 PATE3B3GLJ2 98 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 NGFP01138 241 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 HLA-DQA1P01909 254 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 PSG2P11465 335 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 SPINK2P20155 84 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 TMPRSS3P57727 454 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 GAGE5Q13069 117 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 GAGE6Q13070 117 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 SAMD5Q5TGI4 173 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 GALMQ96C23 342 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 ZNF488Q96MN9 340 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 HES4Q9HCC6 221 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 DYSFO75923 2080 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 TRAV24A0A0B4J272 114 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 C5orf49A4QMS7 147 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 IGKV1-39P01597 117 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 IGKV1D-39P04432 117 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 AMY1AP04745 511 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 F2RP25116 425 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 FCGR2BP31994 310 aaPredicted RBP6.5□□□□□ -1.37
UBR1-202ENST00000546274 CAMPP49913 170 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 PLA2G2CQ5R387 149 aa6.5□□□□□ -1.37
UBR1-202ENST00000546274 SPACA3Q8IXA5 215 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms