RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 MGST3O14880 152 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 CEACAM8P31997 349 aaPredicted RBP11.62□□□□□ -0.55
SRP54-202ENST00000546080 FABP6P51161 128 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 RPL8P62917 257 aaKnown RBP11.62□□□□□ -0.55
SRP54-202ENST00000546080 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
SRP54-202ENST00000546080 ASPHD1Q5U4P2 390 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 LEAP2Q969E1 77 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 GRAMD2BQ96HH9 432 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 CACNA1DQ01668 2161 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 AGFG2O95081 481 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 CER1O95813 267 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 HOXC12P31275 282 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 GDF5OSQ5U4N7 250 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 NUP35Q8NFH5 326 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 LINC00479Q96M42 142 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 SPRR3Q9UBC9 169 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 PRNDQ9UKY0 176 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 FRYLO94915 3013 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 IGKV1D-17A0A075B6S4 117 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 C2orf70A6NJV1 201 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
SRP54-202ENST00000546080 GPR6P46095 362 aaPredicted RBP11.61□□□□□ -0.55
SRP54-202ENST00000546080 VAMP3Q15836 100 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 CR1LQ2VPA4 569 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 FAM231DQ6ZW35 169 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 MBD6Q96DN6 1003 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 GUCD1Q96NT3 240 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 MRPL32Q9BYC8 188 aaKnown RBP11.61□□□□□ -0.55
SRP54-202ENST00000546080 CALYQ9NYX4 217 aa11.61□□□□□ -0.55
SRP54-202ENST00000546080 TRGV5A0A0B4J1U4 118 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 PRCDQ00LT1 54 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 RNF151Q2KHN1 245 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 SNRNP40Q96DI7 357 aaKnown RBP11.6□□□□□ -0.55
SRP54-202ENST00000546080 ZPBPQ9BS86 351 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 SSBP4Q9BWG4 385 aaPredicted RBP11.6□□□□□ -0.55
SRP54-202ENST00000546080 TRAV30A0A087WSZ9 112 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 OR2J3O76001 311 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 NUDT10Q8NFP7 164 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 OR9G1Q8NH87 305 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 MAFAQ8NHW3 353 aaPredicted RBP11.6□□□□□ -0.55
SRP54-202ENST00000546080 NUDT11Q96G61 164 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 LOXL4Q96JB6 756 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 CHRDL1Q9BU40 450 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 TMEM70Q9BUB7 260 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 CLEC5AQ9NY25 188 aa11.6□□□□□ -0.55
SRP54-202ENST00000546080 AMMECR1Q9Y4X0 333 aaPredicted RBP11.6□□□□□ -0.55
SRP54-202ENST00000546080 IGHV3OR15-7A0A075B7D8 119 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 CAMPP49913 170 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 MZT1Q08AG7 82 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 CT45A1Q5HYN5 189 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 UTF1Q5T230 341 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 PRR27Q6MZM9 219 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.59□□□□□ -0.55
SRP54-202ENST00000546080 ZNRF1Q8ND25 227 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 CT45A3Q8NHU0 189 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 ZNF596Q8TC21 504 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 ST6GALNAC6Q969X2 333 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 SLC25A2Q9BXI2 301 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 DNAJC13O75165 2243 aa11.59□□□□□ -0.55
SRP54-202ENST00000546080 TRAV5A0A0B4J249 113 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 SRRM5B3KS81 715 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 C21orf140B9A014 251 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 IGKV3-15P01624 115 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 LRRC10Q5BKY1 277 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 KIR3DL3Q8N743 410 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 TMEM105Q8N8V8 129 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 ADTRPQ96IZ2 230 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 ZNF257Q9Y2Q1 563 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 OR4C46A6NHA9 309 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 HIGD1CA8MV81 97 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 PEX7O00628 323 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
SRP54-202ENST00000546080 POU2AF1Q16633 256 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 C2orf83Q53S99 150 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 FAM162BQ5T6X4 162 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 MORN5Q5VZ52 161 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 MDS2Q8NDY4 140 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 FAM167A-AS1Q96KT0 104 aa11.58□□□□□ -0.56
SRP54-202ENST00000546080 UPK2O00526 184 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 MLANAQ16655 118 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 Q6ZT83 130 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 ST20Q9HBF5 79 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 RAB9BQ9NP90 201 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 A0A1W2PN81 502 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 C9orf172C9J069 976 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 CECR9P0C854 216 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 CD46P15529 392 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 ATP5IP56385 69 aaPredicted RBP11.57□□□□□ -0.56
SRP54-202ENST00000546080 MPV17L2Q567V2 206 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 ETFRF1Q6IPR1 90 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 ZNF329Q86UD4 541 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 GCSAMQ8N6F7 178 aa11.57□□□□□ -0.56
SRP54-202ENST00000546080 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 PYYP10082 97 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 CD69Q07108 199 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 C17orf58Q2M2W7 97 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms