RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 A0A0B4J293 547 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 IGHV7-4-1A0A0J9YVY3 117 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 GNG7O60262 68 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 IGHV3-48P01763 117 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 CTSDP07339 412 aaPredicted RBP16.89■□□□□ 0.29
CHD4-214ENST00000545942 P0C879 139 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 SCGB2B2Q4G0G5 96 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 SPINK9Q5DT21 86 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 SLC35G3Q8N808 338 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 CCDC71LQ8N9Z2 235 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 TMEM116Q8NCL8 245 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 RNF2Q99496 336 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 RHPN1-AS1Q9BWJ2 59 aa16.89■□□□□ 0.29
CHD4-214ENST00000545942 MRPS26Q9BYN8 205 aaKnown RBP16.89■□□□□ 0.29
CHD4-214ENST00000545942 INS-IGF2F8WCM5 200 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 CHEK1O14757 476 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 RGS5O15539 181 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 RAB3DO95716 219 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 IFNA17P01571 189 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 SNCAP37840 140 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 TRIM16LQ309B1 348 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 STEAP1BQ6NZ63 245 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 Q6ZWC4 215 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 GPR141Q7Z602 305 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 PDCD10Q9BUL8 212 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 MIXL1Q9H2W2 232 aa16.88■□□□□ 0.29
CHD4-214ENST00000545942 LYSTQ99698 3801 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 TRAV14DV4A0A0A6YYC5 116 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 GABARAPH6UMI1 98 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 ST8SIA3O43173 380 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 B3GALNT1O75752 331 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 JTBO76095 146 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 MRPS10P82664 201 aaKnown RBP16.87■□□□□ 0.29
CHD4-214ENST00000545942 SSBP1Q04837 148 aaKnown RBP16.87■□□□□ 0.29
CHD4-214ENST00000545942 SP6Q3SY56 376 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 OR13C8Q8NGS7 320 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 TP53TG1Q9Y2A0 90 aa16.87■□□□□ 0.29
CHD4-214ENST00000545942 KIR2DL5BA0A0G2JN68 375 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 KIR2DL5BA0A0G2JPC4 375 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 UBE2CO00762 179 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 UCP1P25874 307 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 NPBWR1P48145 328 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 ALDH3B2P48448 385 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 KIR2DL5AQ8N109 375 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 DUSP18Q8NEJ0 188 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 KIR2DL5BQ8NHK3 375 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 MARCH1Q8TCQ1 289 aa16.86■□□□□ 0.29
CHD4-214ENST00000545942 RRNAD1Q96FB5 475 aaKnown RBP16.86■□□□□ 0.29
CHD4-214ENST00000545942 IGHV3-49A0A0A0MS15 119 aa16.85■□□□□ 0.29
CHD4-214ENST00000545942 SUB1P53999 127 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHD4-214ENST00000545942 MEF2DQ14814 521 aa16.85■□□□□ 0.29
CHD4-214ENST00000545942 SPCS2Q15005 226 aa16.85■□□□□ 0.29
CHD4-214ENST00000545942 WFDC3Q8IUB2 231 aa16.85■□□□□ 0.29
CHD4-214ENST00000545942 GINS3Q9BRX5 216 aa16.85■□□□□ 0.29
CHD4-214ENST00000545942 CORTO00230 105 aa16.84■□□□□ 0.29
CHD4-214ENST00000545942 CTDSP2O14595 271 aa16.84■□□□□ 0.29
CHD4-214ENST00000545942 SPRY2O43597 315 aa16.84■□□□□ 0.29
CHD4-214ENST00000545942 BMI1P35226 326 aa16.84■□□□□ 0.29
CHD4-214ENST00000545942 HOXA1P49639 335 aaPredicted RBP16.84■□□□□ 0.29
CHD4-214ENST00000545942 DEFB135Q30KP9 77 aa16.84■□□□□ 0.29
CHD4-214ENST00000545942 PVRIGQ6DKI7 326 aa16.84■□□□□ 0.29
CHD4-214ENST00000545942 STPG3Q8N7X2 389 aa16.84■□□□□ 0.29
CHD4-214ENST00000545942 RNASE11Q8TAA1 199 aaKnown RBP16.84■□□□□ 0.29
CHD4-214ENST00000545942 GALNT14Q96FL9 552 aa16.84■□□□□ 0.29
CHD4-214ENST00000545942 ETV6P41212 452 aa16.83■□□□□ 0.28
CHD4-214ENST00000545942 FAAP20Q6NZ36 180 aa16.83■□□□□ 0.28
CHD4-214ENST00000545942 SMIM4Q8WVI0 70 aa16.83■□□□□ 0.28
CHD4-214ENST00000545942 C6orf62Q9GZU0 229 aaPredicted RBP16.83■□□□□ 0.28
CHD4-214ENST00000545942 ENY2Q9NPA8 101 aa16.83■□□□□ 0.28
CHD4-214ENST00000545942 C14orf166Q9Y224 244 aaKnown RBP16.83■□□□□ 0.28
CHD4-214ENST00000545942 DNAH1Q9P2D7 4330 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 IGHV3OR16-13A0A075B7E8 117 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 IGHV3-74A0A0B4J1X5 117 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 A0A0G2JRQ6 117 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 CD5P06127 495 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 RNASE2P10153 161 aaKnown RBP16.82■□□□□ 0.28
CHD4-214ENST00000545942 RPL35AP18077 110 aaKnown RBP16.82■□□□□ 0.28
CHD4-214ENST00000545942 TFPI2P48307 235 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 CMC4P56277 68 aaPredicted RBP16.82■□□□□ 0.28
CHD4-214ENST00000545942 FAM90A2PQ658T7 463 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 TOMM20LQ6UXN7 152 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 TMEM222Q9H0R3 208 aa16.82■□□□□ 0.28
CHD4-214ENST00000545942 IGKV3-7A0A075B6H7 116 aa16.81■□□□□ 0.28
CHD4-214ENST00000545942 DISC1C4P0D8 188 aa16.81■□□□□ 0.28
CHD4-214ENST00000545942 CDS2O95674 445 aa16.81■□□□□ 0.28
CHD4-214ENST00000545942 SURF2Q15527 256 aaPredicted RBP16.81■□□□□ 0.28
CHD4-214ENST00000545942 ZNF600Q6ZNG1 722 aa16.81■□□□□ 0.28
CHD4-214ENST00000545942 APRG1Q8IVJ8 170 aa16.81■□□□□ 0.28
CHD4-214ENST00000545942 FAM219AQ8IW50 185 aa16.81■□□□□ 0.28
CHD4-214ENST00000545942 MAP6D1Q9H9H5 199 aa16.81■□□□□ 0.28
CHD4-214ENST00000545942 PUS1Q9Y606 427 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHD4-214ENST00000545942 A0A0J9YWU9 116 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 TEX13DA0A0J9YY54 714 aaPredicted RBP16.8■□□□□ 0.28
CHD4-214ENST00000545942 TMEM50AO95807 157 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 OR5AC1P0C628 307 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 PAFAH1B2P68402 229 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 TNFRSF9Q07011 255 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 LYG2Q86SG7 212 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 CLVS1Q8IUQ0 354 aaPredicted RBP16.8■□□□□ 0.28
CHD4-214ENST00000545942 RAB2BQ8WUD1 216 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms