RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 K7EIM0 57 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 WRBO00258 174 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 SSSCA1O60232 199 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 IGHV3-48P01763 117 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 EIF2B2P49770 351 aaKnown RBP12.59□□□□□ -0.39
LIMS2-217ENST00000545738 ERHP84090 104 aaKnown RBP12.59□□□□□ -0.39
LIMS2-217ENST00000545738 SHISA2Q6UWI4 295 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 KLHL30-AS1Q8NEE0 82 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 UBE2E2Q96LR5 201 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 C11orf1Q9H5F2 150 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 FBXL7Q9UJT9 491 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 H3BP45 60 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 K7EPK0 472 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 RAB32Q13637 225 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 MLANAQ16655 118 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 SLC25A24Q6NUK1 477 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 ETV3LQ6ZN32 361 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 NDUFA11Q86Y39 141 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 NECAP1Q8NC96 275 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 SLC24A4Q8NFF2 622 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 CCDC140Q96MF4 163 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 OR4C12Q96R67 309 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 NEURL2Q9BR09 285 aa12.59□□□□□ -0.39
LIMS2-217ENST00000545738 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-217ENST00000545738 MRPL36Q9P0J6 103 aaKnown RBP12.59□□□□□ -0.39
LIMS2-217ENST00000545738 C15orf62A8K5M9 175 aa12.58□□□□□ -0.4
LIMS2-217ENST00000545738 F8W735 103 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-217ENST00000545738 I3L2K1 104 aa12.58□□□□□ -0.4
LIMS2-217ENST00000545738 TSPAN15O95858 294 aa12.58□□□□□ -0.4
LIMS2-217ENST00000545738 ENY2Q9NPA8 101 aa12.58□□□□□ -0.4
LIMS2-217ENST00000545738 ZFP57Q9NU63 452 aa12.58□□□□□ -0.4
LIMS2-217ENST00000545738 H0YIZ8 118 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 SNCAP37840 140 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 RRAS2P62070 204 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-217ENST00000545738 CTAG1AP78358 180 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 C2orf83Q53S99 150 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 CHAC2Q8WUX2 184 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 C4orf3Q8WVX3 66 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 MISP3Q96FF7 219 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 RAX2Q96IS3 184 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 MED28Q9H204 178 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 LSM5Q9Y4Y9 91 aaKnown RBP12.57□□□□□ -0.4
LIMS2-217ENST00000545738 FAM223BA6NKX1 122 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 NPY1RP25929 384 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 HTR2BP41595 481 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 EXOSC2Q13868 293 aaKnown RBP12.57□□□□□ -0.4
LIMS2-217ENST00000545738 LRRC37A5PQ49AS3 106 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 ZNF343Q6P1L6 599 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 FAM223AQ8IWN6 122 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 SCARB1Q8WTV0 552 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 PINX1Q96BK5 328 aaKnown RBP12.57□□□□□ -0.4
LIMS2-217ENST00000545738 NMES1Q9C002 83 aa12.57□□□□□ -0.4
LIMS2-217ENST00000545738 CCNKO75909 580 aa12.56□□□□□ -0.4
LIMS2-217ENST00000545738 MT-CO2P00403 227 aa12.56□□□□□ -0.4
LIMS2-217ENST00000545738 LGALS1P09382 135 aaKnown RBP12.56□□□□□ -0.4
LIMS2-217ENST00000545738 ZNF414Q96IQ9 312 aa12.56□□□□□ -0.4
LIMS2-217ENST00000545738 HIPK2Q9H2X6 1198 aa12.56□□□□□ -0.4
LIMS2-217ENST00000545738 ZMAT5Q9UDW3 170 aaKnown RBP12.56□□□□□ -0.4
LIMS2-217ENST00000545738 CACFD1Q9UGQ2 172 aa12.56□□□□□ -0.4
LIMS2-217ENST00000545738 IGHV4OR15-8A0A075B7B6 117 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 A0A087WW49 117 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 ANKRD34BA5PLL1 514 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 NUDT19A8MXV4 375 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 PRSS46E5RG02 174 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 RGS13O14921 159 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 MED6O75586 246 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 IFNA10P01566 189 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 HIST1H1BP16401 226 aaKnown RBP12.55□□□□□ -0.4
LIMS2-217ENST00000545738 S100A10P60903 97 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 ATP5G2Q06055 141 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 Q5BKY6 102 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 MRPL41Q8IXM3 137 aaKnown RBP12.55□□□□□ -0.4
LIMS2-217ENST00000545738 ZNF502Q8TBZ5 544 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 PPP1R1CQ8WVI7 109 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 USMG5Q96IX5 58 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 OR5AC2Q9NZP5 309 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 U3KQ87 197 aa12.55□□□□□ -0.4
LIMS2-217ENST00000545738 PMS2P5A8MQ11 134 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 M6PRP20645 277 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 RUNX1Q01196 453 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 SPANXN5Q5MJ07 72 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 ZC4H2Q9NQZ6 224 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 A0A0G2JLM5 398 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 PPP5D1E7EU14 171 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 FHL3Q13643 280 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 HAPLN4Q86UW8 402 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 OR11H1Q8NG94 326 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 SUN5Q8TC36 379 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 SMIM8Q96KF7 97 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 PSENENQ9NZ42 101 aa12.54□□□□□ -0.4
LIMS2-217ENST00000545738 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
LIMS2-217ENST00000545738 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.53□□□□□ -0.4
LIMS2-217ENST00000545738 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
LIMS2-217ENST00000545738 G3V3Q6 166 aa12.53□□□□□ -0.4
LIMS2-217ENST00000545738 BMPR1BO00238 502 aa12.53□□□□□ -0.4
LIMS2-217ENST00000545738 DEDDO75618 318 aa12.53□□□□□ -0.4
LIMS2-217ENST00000545738 CLEC19AQ6UXS0 136 aa12.53□□□□□ -0.4
LIMS2-217ENST00000545738 OR1L6Q8NGR2 347 aa12.53□□□□□ -0.4
LIMS2-217ENST00000545738 CIB3Q96Q77 187 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-217ENST00000545738 RNF126Q9BV68 326 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms