RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CBX3Q13185 183 aa11.06□□□□□ -0.64
CLSTN3-216ENST00000545663 CMTM1Q8IZ96 169 aa11.06□□□□□ -0.64
CLSTN3-216ENST00000545663 MOB3AQ96BX8 217 aa11.06□□□□□ -0.64
CLSTN3-216ENST00000545663 C7orf50Q9BRJ6 194 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-216ENST00000545663 ZNF2Q9BSG1 426 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-216ENST00000545663 NAP1L6A6NFF2 107 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 OR4C46A6NHA9 309 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 HMX3A6NHT5 357 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 M0R1X1 148 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 CLEC3BP05452 202 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 RRASP10301 218 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 RPA2P15927 270 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 UCP3P55916 312 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 KRTAP10-2P60368 255 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 SURF2Q15527 256 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 Q5VSD8 79 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 CENPSQ8N2Z9 138 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 TERB2Q8NHR7 220 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 TRIM63Q969Q1 353 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 ZNF486Q96H40 463 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 HSD17B10Q99714 261 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 SLC5A7Q9GZV3 580 aa11.05□□□□□ -0.64
CLSTN3-216ENST00000545663 CTSDP07339 412 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-216ENST00000545663 ZNF66Q6ZN08 573 aa11.04□□□□□ -0.64
CLSTN3-216ENST00000545663 MFSD4AQ8N468 514 aa11.04□□□□□ -0.64
CLSTN3-216ENST00000545663 ZFAND1Q8TCF1 268 aa11.04□□□□□ -0.64
CLSTN3-216ENST00000545663 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
CLSTN3-216ENST00000545663 PRELID3BQ9Y3B1 194 aa11.04□□□□□ -0.64
CLSTN3-216ENST00000545663 J3QL48 77 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 M0QYG6 137 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 TFPI2P48307 235 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 CATR1Q13166 79 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 KLF9Q13886 244 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 RTL8BQ17RB0 113 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 LAMTOR1Q6IAA8 161 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 SECTM1Q8WVN6 248 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 AIFM2Q9BRQ8 373 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 SDHAF2Q9NX18 166 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 UFC1Q9Y3C8 167 aa11.03□□□□□ -0.64
CLSTN3-216ENST00000545663 NACAE9PAV3 2078 aa11.02□□□□□ -0.64
CLSTN3-216ENST00000545663 GPR31O00270 319 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 GIG44P09565 113 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 IL7P13232 177 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 FXYD4P59646 89 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 SCGB2B2Q4G0G5 96 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 LHFPL1Q86WI0 220 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 OR4C16Q8NGL9 310 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 SLC25A21Q9BQT8 299 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 ZNF430Q9H8G1 570 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 MCUBQ9NWR8 336 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 MDFICQ9P1T7 246 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 X6R8D5 127 aa11.02□□□□□ -0.65
CLSTN3-216ENST00000545663 PIGBOS1A0A0B4J2F0 54 aa11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 MFSD2BA6NFX1 497 aa11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 B3GALNT1O75752 331 aa11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 ELLP55199 621 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 CCDC71LQ8N9Z2 235 aa11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 TEX45Q8NA69 505 aa11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 EEF1AKMT3Q96AZ1 226 aa11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 SPIN2AQ99865 258 aa11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 SPIN2BQ9BPZ2 258 aa11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 FAM212BQ9NTI7 297 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-216ENST00000545663 IGHV3OR16-8A0A075B7F1 116 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 C15orf61A6NNL5 157 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 TEX22C9J3V5 150 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 ZNF207O43670 478 aaKnown RBP11□□□□□ -0.65
CLSTN3-216ENST00000545663 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 MIFP14174 115 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 MYOD1P15172 320 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 PGAM2P15259 253 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 GNRHRP30968 328 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 GPR183P32249 361 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 DUTP33316 252 aaKnown RBP11□□□□□ -0.65
CLSTN3-216ENST00000545663 UBE2KP61086 200 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 BAK1Q16611 211 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 AADACL3Q5VUY0 350 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 KCTD9Q7L273 389 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 LYPD1Q8N2G4 141 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 C6orf223Q8N319 242 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 OR51S1Q8NGJ8 323 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 HRASLSQ9HDD0 168 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 CCL28Q9NRJ3 127 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 C14orf166Q9Y224 244 aaKnown RBP11□□□□□ -0.65
CLSTN3-216ENST00000545663 ZNF257Q9Y2Q1 563 aa11□□□□□ -0.65
CLSTN3-216ENST00000545663 IGKV3-7A0A075B6H7 116 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 E7EUB6 86 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 J3QRK9 145 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 RBFOX2O43251 390 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■■□ 25.7
CLSTN3-216ENST00000545663 ZNF735P0CB33 412 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 PSMB6P28072 239 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 RND3P61587 244 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 RNF212Q495C1 297 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 MZT2BQ6NZ67 158 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 SSX9Q7RTT3 188 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 OR4D10Q8NGI6 311 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 OR4S2Q8NH73 311 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 OSR1Q8TAX0 266 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 C5orf30Q96GV9 206 aa10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 TSC22D3Q99576 134 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms