RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 RAB11AP62491 216 aa9.11□□□□□ -0.95
SNHG1-221ENST00000544983 SPINK9Q5DT21 86 aa9.11□□□□□ -0.95
SNHG1-221ENST00000544983 ETFRF1Q6IPR1 90 aa9.11□□□□□ -0.95
SNHG1-221ENST00000544983 TXN2Q99757 166 aa9.11□□□□□ -0.95
SNHG1-221ENST00000544983 NMES1Q9C002 83 aa9.11□□□□□ -0.95
SNHG1-221ENST00000544983 MED28Q9H204 178 aa9.11□□□□□ -0.95
SNHG1-221ENST00000544983 RANGRFQ9HD47 186 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-221ENST00000544983 ALG5Q9Y673 324 aa9.11□□□□□ -0.95
SNHG1-221ENST00000544983 RPS10-NUDT3A0A1W2PQS6 291 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 CCL24O00175 119 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 CCSO14618 274 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 GOSR2O14653 212 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 SCAF4O95104 1147 aaKnown RBP9.1□□□□□ -0.95
SNHG1-221ENST00000544983 NDUFB8O95169 186 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 HSPB1P04792 205 aaKnown RBP9.1□□□□□ -0.95
SNHG1-221ENST00000544983 OR8U8P0C7N1 319 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 PVALBP20472 110 aaPredicted RBP9.1□□□□□ -0.95
SNHG1-221ENST00000544983 ZP3P21754 424 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 FCGR2BP31994 310 aaPredicted RBP9.1□□□□□ -0.95
SNHG1-221ENST00000544983 ZNF616Q08AN1 781 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 IL15RAQ13261 267 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 DPF1Q92782 380 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 SMIM8Q96KF7 97 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 GNB4Q9HAV0 340 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 PEF1Q9UBV8 284 aaKnown RBP9.1□□□□□ -0.95
SNHG1-221ENST00000544983 DMRT1Q9Y5R6 373 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 ANK2Q01484 3957 aa9.1□□□□□ -0.95
SNHG1-221ENST00000544983 VWFP04275 2813 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.09□□□□□ -0.95
SNHG1-221ENST00000544983 K7EIM0 57 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 TSC22D2O75157 780 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 SCGB2A1O75556 95 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 NXPH3O95157 252 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-221ENST00000544983 PF4P02776 101 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 RLN2P04090 185 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 PET100P0DJ07 73 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 SLC25A4P12235 298 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 MFAP2P55001 183 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 POLR2GP62487 172 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNHG1-221ENST00000544983 FHL3Q13643 280 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 PRR31Q5SQ13 230 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 SPSB3Q6PJ21 355 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 C8orf86Q6ZUL3 223 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 OR1N2Q8NGR9 330 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 CACNG8Q8WXS5 425 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 MISP3Q96FF7 219 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 MAGT1Q9H0U3 335 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 C21orf62Q9NYP8 219 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 MGAT4CQ9UBM8 478 aa9.09□□□□□ -0.95
SNHG1-221ENST00000544983 STRAPQ9Y3F4 350 aaKnown RBP9.09□□□□□ -0.95
SNHG1-221ENST00000544983 LINC01619G3V211 115 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 I3L2K1 104 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 SSSCA1O60232 199 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 SCGB1D2O95969 90 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 MT-CO2P00403 227 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 IGHV3-11P01762 117 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 IFNA4P05014 189 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 GPX4P36969 197 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-221ENST00000544983 NPBWR1P48145 328 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 MFAP4P55083 255 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 RRAS2P62070 204 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-221ENST00000544983 C19orf35Q6ZS72 473 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 OR11H1Q8NG94 326 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 ZNF502Q8TBZ5 544 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 SCARB1Q8WTV0 552 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 BSCL2Q96G97 398 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-221ENST00000544983 RAX2Q96IS3 184 aa9.08□□□□□ -0.96
SNHG1-221ENST00000544983 MFSD2BA6NFX1 497 aa9.07□□□□□ -0.96
SNHG1-221ENST00000544983 L7N2F9 121 aa9.07□□□□□ -0.96
SNHG1-221ENST00000544983 IAPPP10997 89 aa9.07□□□□□ -0.96
SNHG1-221ENST00000544983 OPRK1P41145 380 aa9.07□□□□□ -0.96
SNHG1-221ENST00000544983 H2BFSP57053 126 aa9.07□□□□□ -0.96
SNHG1-221ENST00000544983 VAMP2P63027 116 aa9.07□□□□□ -0.96
SNHG1-221ENST00000544983 PINX1Q96BK5 328 aaKnown RBP9.07□□□□□ -0.96
SNHG1-221ENST00000544983 OR5B12Q96R08 314 aa9.07□□□□□ -0.96
SNHG1-221ENST00000544983 PSENENQ9NZ42 101 aa9.07□□□□□ -0.96
SNHG1-221ENST00000544983 RCL1Q9Y2P8 373 aaKnown RBP9.07□□□□□ -0.96
SNHG1-221ENST00000544983 MGAM2Q2M2H8 2515 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 PKD1L1Q8TDX9 2849 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 TRAV30A0A087WSZ9 112 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 ANKRD34BA5PLL1 514 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 C15orf62A8K5M9 175 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 K7EPK0 472 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 GGCTO75223 188 aaKnown RBP9.06□□□□□ -0.96
SNHG1-221ENST00000544983 SIX6O95475 246 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 CLEC3BP05452 202 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 S100A10P60903 97 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 FGL1Q08830 312 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 RAB32Q13637 225 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 SPANXN5Q5MJ07 72 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 ETV3LQ6ZN32 361 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 C18orf65Q6ZTR6 163 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 TMEM116Q8NCL8 245 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 WFDC9Q8NEX5 89 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 OR4X1Q8NH49 305 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 DCUN1D4Q92564 292 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 CCDC140Q96MF4 163 aa9.06□□□□□ -0.96
SNHG1-221ENST00000544983 MCRIP2Q9BUT9 160 aaKnown RBP9.06□□□□□ -0.96
SNHG1-221ENST00000544983 LSM5Q9Y4Y9 91 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms