RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 UPK2O00526 184 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 HBBP68871 147 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 LY6G6FQ5SQ64 297 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 PHF3Q92576 2039 aaKnown RBP10.68□□□□□ -0.7
CHD4-211ENST00000544484 CEACAM4O75871 244 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 HLA-DRB1P01911 266 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 H0YIZ8 118 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 CLPSP04118 112 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 FOLR2P14207 255 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 SMAGPQ0VAQ4 97 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 NBR2O15453 112 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 KCNS1Q96KK3 526 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 FBLN5Q9UBX5 448 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 NUP37Q8NFH4 326 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 USF3Q68DE3 2245 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 PSMB11A5LHX3 300 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 E9PLN8 166 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 TCF21O43680 179 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 PMCHL1Q16048 86 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 VKORC1Q9BQB6 163 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 A0A0G2JLM5 398 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 COL5A1-AS1Q5SY13 56 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 C5orf24Q7Z6I8 188 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 COL25A1Q9BXS0 654 aaPredicted RBP10.67□□□□□ -0.7
CHD4-211ENST00000544484 LINC00527Q9UJ94 153 aa10.67□□□□□ -0.7
CHD4-211ENST00000544484 COL4A6Q14031 1691 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 IGKV1-27A0A075B6S5 117 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 PLAURQ03405 335 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 LBHQ53QV2 105 aaPredicted RBP10.66□□□□□ -0.7
CHD4-211ENST00000544484 DNLZQ5SXM8 178 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 COLCA1Q6ZS62 124 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 THBDP07204 575 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 CDX1P47902 265 aaPredicted RBP10.66□□□□□ -0.7
CHD4-211ENST00000544484 KIR2DL4Q99706 377 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 NOTCH3Q9UM47 2321 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 VENTXO95231 258 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 GNG5P63218 68 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 HIST1H4GQ99525 98 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 YAE1D1Q9NRH1 226 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 DOCK10Q96BY6 2186 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 OR9G9P0C7N8 305 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 RNASEH2CQ8TDP1 164 aaKnown RBP10.66□□□□□ -0.7
CHD4-211ENST00000544484 CACNG8Q8WXS5 425 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 PCNX1Q96RV3 2341 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 F8VVB4 439 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 F8VWA3 439 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 TBR1Q16650 682 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 ZNF324BQ6AW86 544 aaPredicted RBP10.66□□□□□ -0.7
CHD4-211ENST00000544484 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 RNF144BQ7Z419 303 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 GLMPQ8WWB7 406 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 Q9H3A6 140 aa10.66□□□□□ -0.7
CHD4-211ENST00000544484 C15orf61A6NNL5 157 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 KIR3DL3Q8N743 410 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 FAM131CQ96AQ9 280 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 VWA8A3KMH1 1905 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 TMEM144Q7Z5S9 345 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 TIMM23O14925 209 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 IL18BPO95998 194 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 DUTP33316 252 aaKnown RBP10.65□□□□□ -0.7
CHD4-211ENST00000544484 TCF20Q9UGU0 1960 aaKnown RBP10.65□□□□□ -0.7
CHD4-211ENST00000544484 LHFPL4Q7Z7J7 247 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 C11orf44Q8N8P7 122 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 SELENOKQ9Y6D0 94 aa10.65□□□□□ -0.7
CHD4-211ENST00000544484 TMEM136Q6ZRR5 245 aa10.65□□□□□ -0.71
CHD4-211ENST00000544484 OR10W1Q8NGF6 305 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 GTF3AQ92664 365 aaKnown RBP10.64□□□□□ -0.71
CHD4-211ENST00000544484 IL36BQ9NZH7 164 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 PSPNO60542 156 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
CHD4-211ENST00000544484 GCSAMLQ5JQS6 135 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 SLC25A34Q6PIV7 304 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 TMEM262E9PQX1 116 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 PYYP10082 97 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 ADIPOQQ15848 244 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 C10orf55Q5SWW7 151 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 C1QTNF9BB2RNN3 333 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 SRSF3P84103 164 aaKnown RBP10.64□□□□□ -0.71
CHD4-211ENST00000544484 PLSCR4Q9NRQ2 329 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 LILRA1O75019 489 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 NAT1P18440 290 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 TMEM160Q9NX00 188 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 UQCR10Q9UDW1 63 aa10.64□□□□□ -0.71
CHD4-211ENST00000544484 SBF1O95248 1867 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 OR4X2Q8NGF9 303 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 TRBV9A0A0B4J1U6 114 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 EMP1P54849 157 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 ZNF672Q499Z4 452 aaPredicted RBP10.63□□□□□ -0.71
CHD4-211ENST00000544484 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 RNASE7Q9H1E1 156 aaKnown RBP10.63□□□□□ -0.71
CHD4-211ENST00000544484 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
CHD4-211ENST00000544484 TRAV40A0A0B4J280 105 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 RNASE1P07998 156 aaKnown RBP10.63□□□□□ -0.71
CHD4-211ENST00000544484 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
CHD4-211ENST00000544484 ASIPP42127 132 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 TUBA4BQ9H853 241 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 MEIG1Q5JSS6 88 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms