RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 INS-IGF2F8WCM5 200 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 INSP01308 110 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 ACP7Q6ZNF0 438 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 PILRBQ9UKJ0 227 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 TRAV5A0A0B4J249 113 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 IGHV3-11P01762 117 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 COL4A1P02462 1669 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 DLEC1Q9Y238 1755 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 EVI2AP22794 236 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 COLCA1Q6ZS62 124 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 ATP5L2Q7Z4Y8 100 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 LINC01549A6NIU2 74 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 J3QW42 95 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 GNG5P63218 68 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 CHCHD1Q96BP2 118 aaKnown RBP8.76□□□□□ -1.01
PCDH9-204ENST00000544246 PSCAO43653 123 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 PPBPP02775 128 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 CRYBA2P53672 197 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 SEC11AP67812 179 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 ZNRF1Q8ND25 227 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 CACNG8Q8WXS5 425 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 FAM168AQ92567 244 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 ANAPC10Q9UM13 185 aa8.76□□□□□ -1.01
PCDH9-204ENST00000544246 IGHMP01871 453 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 DTX1Q86Y01 620 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 TMEM170AQ8WVE7 144 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 DNAJC30Q96LL9 226 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 IGHV3OR16-8A0A075B7F1 116 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 CD300EQ496F6 205 aaPredicted RBP8.75□□□□□ -1.01
PCDH9-204ENST00000544246 NR2C2APQ86WQ0 139 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 PVRIGQ6DKI7 326 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 SMPXQ9UHP9 88 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 CCL1P22362 96 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 GZMMP51124 257 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 LHFPL4Q7Z7J7 247 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 ZIC4Q8N9L1 334 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 ARID1BQ8NFD5 2236 aaPredicted RBP8.75□□□□□ -1.01
PCDH9-204ENST00000544246 TRAV8-1A0A0A6YYK1 113 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 RASL10AQ92737 203 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 ABHD17AQ96GS6 310 aa8.75□□□□□ -1.01
PCDH9-204ENST00000544246 PLEKHB2Q96CS7 222 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 GGTLC1Q9BX51 225 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 RNASE7Q9H1E1 156 aaKnown RBP8.74□□□□□ -1.01
PCDH9-204ENST00000544246 KLF12Q9Y4X4 402 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 TRAV14DV4A0A0A6YYC5 116 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 PRR19A6NJB7 356 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 SP9P0CG40 484 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 GZMBP10144 247 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 LAGE3Q14657 143 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 RIPPLY2Q5TAB7 128 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 C7orf69Q9H7B7 122 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 C3orf36Q3SXR2 165 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 MRAPQ8TCY5 172 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 TCRBV4S1A1TA0A5B7 111 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 PRSS22Q9GZN4 317 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 FOXL2P58012 376 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 IFITM3Q01628 133 aa8.74□□□□□ -1.01
PCDH9-204ENST00000544246 C17orf98A8MV24 154 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 TMEM14DPA8MWL7 114 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 C19orf48Q6RUI8 117 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 NDUFAF3Q9BU61 184 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 A0A087WX48 190 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 A0A1W2PRS3 328 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 NRN1LQ496H8 165 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 GTF3AQ92664 365 aaKnown RBP8.73□□□□□ -1.01
PCDH9-204ENST00000544246 C12orf77C9JDV5 145 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 F2Z2F3 143 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 LEPROTO15243 131 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 OVOL1O14753 267 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 CMC4P56277 68 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-204ENST00000544246 RPL23P62829 140 aaKnown RBP8.73□□□□□ -1.01
PCDH9-204ENST00000544246 NSUN5P1Q3KNT7 163 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-204ENST00000544246 SUMO4Q6EEV6 95 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 NBR2O15453 112 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 RSPO4Q2I0M5 234 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-204ENST00000544246 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 GAGE2AQ6NT46 116 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 F5P12259 2224 aa8.73□□□□□ -1.01
PCDH9-204ENST00000544246 CCL20P78556 96 aa8.72□□□□□ -1.01
PCDH9-204ENST00000544246 BHLHA9Q7RTU4 235 aa8.72□□□□□ -1.01
PCDH9-204ENST00000544246 MSGN1A6NI15 193 aa8.72□□□□□ -1.01
PCDH9-204ENST00000544246 CDCP2Q5VXM1 449 aa8.72□□□□□ -1.01
PCDH9-204ENST00000544246 KIAA1551Q9HCM1 1747 aa8.72□□□□□ -1.01
PCDH9-204ENST00000544246 IFI27L1Q96BM0 104 aa8.72□□□□□ -1.01
PCDH9-204ENST00000544246 PSG8Q9UQ74 426 aa8.72□□□□□ -1.01
PCDH9-204ENST00000544246 COX6A1P12074 109 aa8.72□□□□□ -1.01
PCDH9-204ENST00000544246 GATA2P23769 480 aaPredicted RBP8.72□□□□□ -1.01
PCDH9-204ENST00000544246 ZNFX1Q9P2E3 1918 aaKnown RBP8.71□□□□□ -1.01
PCDH9-204ENST00000544246 TMEM8BA6NDV4 472 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 LTBRP36941 435 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 ZP1P60852 638 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 FOXL1Q12952 345 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 C1orf122Q6ZSJ8 110 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 RNF125Q96EQ8 232 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 GNB1LQ9BYB4 327 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 KIF13BQ9NQT8 1826 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 GLRXP35754 106 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 Q6ZT83 130 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms