RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CNIH1O95406 144 aa15.77■□□□□ 0.11
COPS7A-218ENST00000543939 APELAP0DMC3 54 aa15.77■□□□□ 0.11
COPS7A-218ENST00000543939 ADCYAP1P18509 176 aa15.77■□□□□ 0.11
COPS7A-218ENST00000543939 OR1P1Q8NH06 330 aa15.77■□□□□ 0.11
COPS7A-218ENST00000543939 SSMEM1Q8WWF3 244 aa15.77■□□□□ 0.11
COPS7A-218ENST00000543939 ACTR3CQ9C0K3 210 aaPredicted RBP15.77■□□□□ 0.11
COPS7A-218ENST00000543939 EIF5A2Q9GZV4 153 aaKnown RBP15.77■□□□□ 0.11
COPS7A-218ENST00000543939 C7orf69Q9H7B7 122 aa15.77■□□□□ 0.11
COPS7A-218ENST00000543939 HIF1ANQ9NWT6 349 aa15.77■□□□□ 0.11
COPS7A-218ENST00000543939 CELSR2Q9HCU4 2923 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 IGKV1OR2-108A0A075B7D4 117 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 IGHV3OR16-10A0A075B7F0 116 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 CTXND1A0A1B0GTU2 59 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 MAP1LC3B2A6NCE7 125 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 RPL29P47914 159 aaKnown RBP15.76■□□□□ 0.11
COPS7A-218ENST00000543939 FXYD3Q14802 87 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 C10orf91Q5T1B1 145 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 SLC35E1Q96K37 410 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 MAP1LC3BQ9GZQ8 125 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 SLC25A22Q9H936 323 aa15.76■□□□□ 0.11
COPS7A-218ENST00000543939 F11RQ9Y624 299 aaKnown RBP15.76■□□□□ 0.11
COPS7A-218ENST00000543939 RBFOX3A6NFN3 312 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 NCBP2LA6PVI3 153 aaKnown RBP15.75■□□□□ 0.11
COPS7A-218ENST00000543939 SEC14L6B5MCN3 397 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 CYB5BO43169 146 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 GATA3P23771 443 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 GCSAMLQ5JQS6 135 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 FAM122CQ6P4D5 195 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 ZNF562Q6V9R5 426 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 C19orf35Q6ZS72 473 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 LINC01356Q8N9X3 169 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 OR2T6Q8NHC8 308 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 SLC45A2Q9UMX9 530 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 TENM4Q6N022 2769 aa15.75■□□□□ 0.11
COPS7A-218ENST00000543939 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.75■□□□□ 0.116e-24■■■■■ 88.5
COPS7A-218ENST00000543939 APOC3P02656 99 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 IGHV4-38-2P0DP08 117 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 FGF8P55075 233 aaPredicted RBP15.74■□□□□ 0.11
COPS7A-218ENST00000543939 B2MP61769 119 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 PRR20EP86478 221 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 PRR20CP86479 221 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 PRR20DP86480 221 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 PRR20BP86481 221 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 PRR20AP86496 221 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 LOXL1Q08397 574 aaPredicted RBP15.74■□□□□ 0.11
COPS7A-218ENST00000543939 STPG3Q8N7X2 389 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 Q8N9W7 124 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 RARRES2Q99969 163 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 C1RLQ9NZP8 487 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 EIF3GO75821 320 aaKnown RBP eCLIP15.74■□□□□ 0.11
COPS7A-218ENST00000543939 CRYGCP07315 174 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 SFTA3P0C7M3 94 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 CX3CL1P78423 397 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 BRD3OSQ6XYD6 125 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 RAB24Q969Q5 203 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 MBD6Q96DN6 1003 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 SEC11CQ9BY50 192 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 SMDT1Q9H4I9 107 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 CARHSP1Q9Y2V2 147 aaKnown RBP15.74■□□□□ 0.11
COPS7A-218ENST00000543939 DMRT1Q9Y5R6 373 aa15.74■□□□□ 0.11
COPS7A-218ENST00000543939 VPS13CQ709C8 3753 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 F8W036 122 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 CORTO00230 105 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 LINC00869P0C866 280 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 OR10J1P30954 320 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 CDC34P49427 236 aaPredicted RBP15.73■□□□□ 0.11
COPS7A-218ENST00000543939 ETFRF1Q6IPR1 90 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 ABHD5Q8WTS1 349 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 MISP3Q96FF7 219 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 ACY3Q96HD9 319 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 POLQO75417 2590 aa15.73■□□□□ 0.11
COPS7A-218ENST00000543939 DEFA4P12838 97 aa15.72■□□□□ 0.11
COPS7A-218ENST00000543939 CTRB1P17538 263 aa15.72■□□□□ 0.11
COPS7A-218ENST00000543939 HAGHQ16775 308 aa15.72■□□□□ 0.11
COPS7A-218ENST00000543939 ZNF506Q5JVG8 444 aa15.72■□□□□ 0.11
COPS7A-218ENST00000543939 Q5PR19 223 aa15.72■□□□□ 0.11
COPS7A-218ENST00000543939 CTRB2Q6GPI1 263 aa15.72■□□□□ 0.11
COPS7A-218ENST00000543939 MEGF9Q9H1U4 602 aa15.72■□□□□ 0.11
COPS7A-218ENST00000543939 MRPL36Q9P0J6 103 aaKnown RBP15.72■□□□□ 0.11
COPS7A-218ENST00000543939 CR1P17927 2039 aa15.72■□□□□ 0.11
COPS7A-218ENST00000543939 A0A0U1RQK1 487 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 AVPP01185 164 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 PPT1P50897 306 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 NDPQ00604 133 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 PMS2P11Q13670 270 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 HIST2H2BCQ6DN03 193 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 THAP8Q8NA92 274 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 NPIPB3Q92617 1050 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 ARPC1AQ92747 370 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 FAM103A1Q9BTL3 118 aaKnown RBP15.71■□□□□ 0.11
COPS7A-218ENST00000543939 GNG13Q9P2W3 67 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 CENPEQ02224 2701 aa15.71■□□□□ 0.11
COPS7A-218ENST00000543939 LOC102723971A0A1B0GUV8 181 aa15.71■□□□□ 0.1
COPS7A-218ENST00000543939 RNF223E7ERA6 249 aa15.71■□□□□ 0.1
COPS7A-218ENST00000543939 HMGB3O15347 200 aaKnown RBP15.71■□□□□ 0.1
COPS7A-218ENST00000543939 ICAM4Q14773 271 aa15.71■□□□□ 0.1
COPS7A-218ENST00000543939 KLF17Q5JT82 389 aaPredicted RBP15.71■□□□□ 0.1
COPS7A-218ENST00000543939 SLC25A33Q9BSK2 321 aa15.71■□□□□ 0.1
COPS7A-218ENST00000543939 WNT10AQ9GZT5 417 aa15.71■□□□□ 0.1
COPS7A-218ENST00000543939 SCO1O75880 301 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms