RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PLET1Q6UQ28 207 aa11.59□□□□□ -0.55
CD9-210ENST00000543916 CLEC19AQ6UXS0 136 aa11.59□□□□□ -0.55
CD9-210ENST00000543916 ZNF502Q8TBZ5 544 aa11.59□□□□□ -0.55
CD9-210ENST00000543916 MISP3Q96FF7 219 aa11.59□□□□□ -0.55
CD9-210ENST00000543916 RCC1LQ96I51 464 aaKnown RBP11.59□□□□□ -0.55
CD9-210ENST00000543916 CXorf58Q96LI9 332 aa11.59□□□□□ -0.55
CD9-210ENST00000543916 HEYLQ9NQ87 328 aaPredicted RBP11.59□□□□□ -0.55
CD9-210ENST00000543916 MGAM2Q2M2H8 2515 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 TRBV7-1A0A0A6YYK4 115 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 SAMD5Q5TGI4 173 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 C1QL4Q86Z23 238 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 VN1R17PQ8TDU5 208 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 DTD1Q8TEA8 209 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 SCARB1Q8WTV0 552 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 MARVELD1Q9BSK0 173 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.56
CD9-210ENST00000543916 INMT-MINDY4F8WBC2 141 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 I3L2K1 104 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 CCSO14618 274 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 OVOL1O14753 267 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 IFNA21P01568 189 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 ZP3P21754 424 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 HTR2BP41595 481 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 C12orf45Q8N5I9 185 aaPredicted RBP11.57□□□□□ -0.56
CD9-210ENST00000543916 UXS1Q8NBZ7 420 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 TMEM170AQ8WVE7 144 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 PINX1Q96BK5 328 aaKnown RBP11.57□□□□□ -0.56
CD9-210ENST00000543916 OR10C1Q96KK4 312 aa11.57□□□□□ -0.56
CD9-210ENST00000543916 FAM90A26D6RGX4 464 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 F8W735 103 aaPredicted RBP11.56□□□□□ -0.56
CD9-210ENST00000543916 MT-CO2P00403 227 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 IGHV3-48P01763 117 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 GPR183P32249 361 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 ARL3P36405 182 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 SUB1P53999 127 aaKnown RBP eCLIP11.56□□□□□ -0.56
CD9-210ENST00000543916 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
CD9-210ENST00000543916 RPEL1Q2QD12 228 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 IAH1Q2TAA2 248 aaPredicted RBP11.56□□□□□ -0.56
CD9-210ENST00000543916 FAM209BQ5JX69 171 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 SLC24A4Q8NFF2 622 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 OR4D5Q8NGN0 318 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 MAGT1Q9H0U3 335 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 HIPK2Q9H2X6 1198 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 ZC4H2Q9NQZ6 224 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 C21orf62Q9NYP8 219 aa11.56□□□□□ -0.56
CD9-210ENST00000543916 MEGF8Q7Z7M0 2845 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 OR2T8A6NH00 312 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 PRAF2O60831 178 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 PTTG1O95997 202 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 CLEC3BP05452 202 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 IAPPP10997 89 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 NPY1RP25929 384 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 SYNJ2BPP57105 145 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 C2orf83Q53S99 150 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 ZBTB8BQ8NAP8 495 aaPredicted RBP11.55□□□□□ -0.56
CD9-210ENST00000543916 MCRIP2Q9BUT9 160 aaKnown RBP11.55□□□□□ -0.56
CD9-210ENST00000543916 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
CD9-210ENST00000543916 PALMDQ9NP74 551 aa11.55□□□□□ -0.56
CD9-210ENST00000543916 SEC14L6B5MCN3 397 aa11.54□□□□□ -0.56
CD9-210ENST00000543916 CORTO00230 105 aa11.54□□□□□ -0.56
CD9-210ENST00000543916 SYNGR2O43760 224 aa11.54□□□□□ -0.56
CD9-210ENST00000543916 GGCTO75223 188 aaKnown RBP11.54□□□□□ -0.56
CD9-210ENST00000543916 OR2C1O95371 312 aa11.54□□□□□ -0.56
CD9-210ENST00000543916 ID3Q02535 119 aa11.54□□□□□ -0.56
CD9-210ENST00000543916 BEAN1Q3B7T3 259 aa11.54□□□□□ -0.56
CD9-210ENST00000543916 UBAC2Q8NBM4 344 aa11.54□□□□□ -0.56
CD9-210ENST00000543916 GPN1Q9HCN4 374 aaPredicted RBP11.54□□□□□ -0.56
CD9-210ENST00000543916 SNRPGP15A8MWD9 76 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 WRBO00258 174 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 TGOLN2O43493 480 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 MED6O75586 246 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 IFNA10P01566 189 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 MFAP4P55083 255 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 POLR2GP62487 172 aaKnown RBP eCLIP11.53□□□□□ -0.56
CD9-210ENST00000543916 MLANAQ16655 118 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 Q56UQ5 140 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 KPRPQ5T749 579 aaPredicted RBP11.53□□□□□ -0.56
CD9-210ENST00000543916 ACSM6Q6P461 480 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 BSCL2Q96G97 398 aaPredicted RBP11.53□□□□□ -0.56
CD9-210ENST00000543916 ATP6V0BQ99437 205 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 CHRDL1Q9BU40 450 aa11.53□□□□□ -0.56
CD9-210ENST00000543916 MRPL36Q9P0J6 103 aaKnown RBP11.53□□□□□ -0.56
CD9-210ENST00000543916 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 C15orf62A8K5M9 175 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 FAM25EA8MYX2 175 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 SCGB1D2O95969 90 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.57
CD9-210ENST00000543916 ADMP35318 185 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 OPRK1P41145 380 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 NKX2-1P43699 371 aaPredicted RBP11.52□□□□□ -0.57
CD9-210ENST00000543916 DCTN2Q13561 401 aaKnown RBP11.52□□□□□ -0.57
CD9-210ENST00000543916 C9orf66Q5T8R8 295 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 OR9G4Q8NGQ1 327 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 RNASEH2CQ8TDP1 164 aaKnown RBP11.52□□□□□ -0.57
CD9-210ENST00000543916 ZNF414Q96IQ9 312 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 TXN2Q99757 166 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 GSKIPQ9P0R6 139 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 U3KQ87 197 aa11.52□□□□□ -0.57
CD9-210ENST00000543916 C5orf51A6NDU8 294 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 WIPF1O43516 503 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms