RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ZNF436	Q9C0F3	470 aa	Predicted RBP	7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	STRAP	Q9Y3F4	350 aa	Known RBP	7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545		S4R3C0	116 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	TRBV9	A0A0B4J1U6	114 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	CORT	O00230	105 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	BRI3	O95415	125 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	MT-CO2	P00403	227 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	IGHV3-23	P01764	117 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	OPRK1	P41145	380 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	CAV2	P51636	162 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	MFAP2	P55001	183 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	ATP5I	P56385	69 aa	Predicted RBP	7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	IL15RA	Q13261	267 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	C15orf32	Q32M92	178 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	C2orf83	Q53S99	150 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	NDUFA11	Q86Y39	141 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	RNF152	Q8N8N0	203 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	ZNF114	Q8NC26	417 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	KLHL30-AS1	Q8NEE0	82 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	EEF1AKMT3	Q96AZ1	226 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	SMIM8	Q96KF7	97 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	CXorf58	Q96LI9	332 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	UBE2E2	Q96LR5	201 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	CITED1	Q99966	193 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	GNB4	Q9HAV0	340 aa		7.9	□□□□□ -1.14
CPSF7-221	ENST00000543545	FBN1	P35555	2871 aa	Known RBP	7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	RPS10-NUDT3	A0A1W2PQS6	291 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	ANKRD34B	A5PLL1	514 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	IGHV3-48	P01763	117 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	GIP	P09681	153 aa	Predicted RBP	7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	PET100	P0DJ07	73 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	CDX1	P47902	265 aa	Predicted RBP	7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	TAS2R30	P59541	319 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	EXOSC2	Q13868	293 aa	Known RBP	7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	KIAA0141	Q14154	515 aa	Predicted RBP	7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	KRTAP21-3	Q3LHN1	58 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	ETV3L	Q6ZN32	361 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	C18orf65	Q6ZTR6	163 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	UBAC2	Q8NBM4	344 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	RNASEH2C	Q8TDP1	164 aa	Known RBP	7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR4C12	Q96R67	309 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	DMRT1	Q9Y5R6	373 aa		7.89	□□□□□ -1.15
CPSF7-221	ENST00000543545	FAM24A	A6NFZ4	105 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	C15orf62	A8K5M9	175 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545		E5RGE8	158 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	TSC22D2	O75157	780 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	DEDD	O75618	318 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	MPC2	O95563	127 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	TMEM50A	O95807	157 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	MFAP4	P55083	255 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	PAX9	P55771	341 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	RAP2B	P61225	183 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	MLANA	Q16655	118 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	BSX	Q3C1V8	233 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545		Q56UQ5	140 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR8G2P	Q6IF36	304 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	ETFRF1	Q6IPR1	90 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	ACSM6	Q6P461	480 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	CLEC19A	Q6UXS0	136 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	C8orf86	Q6ZUL3	223 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	THAP6	Q8TBB0	222 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	MYOZ3	Q8TDC0	251 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	VN1R17P	Q8TDU5	208 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	SCARB1	Q8WTV0	552 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	C4orf3	Q8WVX3	66 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	ASB13	Q8WXK3	278 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	DPF1	Q92782	380 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	ZC4H2	Q9NQZ6	224 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	C21orf62	Q9NYP8	219 aa		7.88	□□□□□ -1.15
CPSF7-221	ENST00000543545	TRBV7-1	A0A0A6YYK4	115 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	MFSD2B	A6NFX1	497 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545		I3L2K1	104 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545		K7EIM0	57 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545		M0QZ24	198 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	CLEC3B	P05452	202 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	LGALS1	P09382	135 aa	Known RBP	7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	METTL15P1	P0C7V9	234 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	NPBWR1	P48145	328 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	FGL1	Q08830	312 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	KLK9	Q2XQG4	91 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	ZNF343	Q6P1L6	599 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR4F17	Q8NGA8	305 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR10P1	Q8NGE3	313 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR1N2	Q8NGR9	330 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR2T35	Q8NGX2	323 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	CHAC2	Q8WUX2	184 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	TMEM170A	Q8WVE7	144 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	DCUN1D4	Q92564	292 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	SLC35E1	Q96K37	410 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	DUX3	Q96PT4	197 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR4F4	Q96R69	305 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR5AC2	Q9NZP5	309 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	PEF1	Q9UBV8	284 aa	Known RBP	7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	KLK9	Q9UKQ9	250 aa		7.87	□□□□□ -1.15
CPSF7-221	ENST00000543545	COL6A5	A8TX70	2615 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545		A0A1B0GVG6	124 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	SMCO3	A2RU48	225 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545		H0YIZ8	118 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	CCL24	O00175	119 aa		7.86	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms