RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 CD300LBA8K4G0 201 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 NPBWR2P48146 333 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 ID3Q02535 119 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 FOXL1Q12952 345 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 Q6ZPA2 131 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 GAPTQ8N292 157 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 ZNF611Q8N823 705 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 OR5P3Q8WZ94 311 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 DOCK7Q96N67 2140 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 ZNF442Q9H7R0 627 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 MBNL3Q9NUK0 354 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 FAM215AQ9Y5M1 114 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 DEFA4P12838 97 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 USF1P22415 310 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 RBM11P57052 281 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 ARL16Q0P5N6 197 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 FOXC1Q12948 553 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 RBPMS2Q6ZRY4 209 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 ZDHHC23Q8IYP9 409 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 OSR2Q8N2R0 312 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 CNEP1R1Q8N9A8 125 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 OR10V1Q8NGI7 309 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 OR5B3Q8NH48 314 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 HS3ST6Q96QI5 342 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 SRSF8Q9BRL6 282 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 CACNA1GO43497 2377 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 RIF1Q5UIP0 2472 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 IGKV3-15P01624 115 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 PSG2P11465 335 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 VDAC1P21796 283 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 THBS3P49746 956 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 GPM6AP51674 278 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 LINC00310P59036 64 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 TBC1D28Q2M2D7 210 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 SPANXN5Q5MJ07 72 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 ZNF324BQ6AW86 544 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 CENPVQ7Z7K6 275 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 C1orf174Q8IYL3 243 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 RPP25LQ8N5L8 163 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 OR4A5Q8NH83 315 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 SCNM1Q9BWG6 230 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 C1orf43Q9BWL3 253 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 TRAV8-6A0A0B4J262 113 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 SPINK4O60575 86 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 IGKV1D-33P01593 117 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 IGKV1-33P01594 117 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 CD99P14209 185 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 TGFBR3Q03167 851 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 ZNF90Q03938 601 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 ZNF818PQ6ZRF7 136 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 SPACA3Q8IXA5 215 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 RPRMLQ8N4K4 120 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 DEFB125Q8N687 156 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 KLHDC1Q8N7A1 406 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 OR51H1Q8NH63 302 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 PSENENQ9NZ42 101 aa6.6□□□□□ -1.35
PDLIM5-221ENST00000542407 TMEM250H0YL14 139 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 FCN1O00602 326 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 RS1O15537 224 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 BCL3P20749 454 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 GNG4P50150 75 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 TCL1AP56279 114 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 RPS16P62249 146 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 RPL8P62917 257 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 ZNF474Q6S9Z5 364 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 ST6GALNAC6Q969X2 333 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 OR4C12Q96R67 309 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 NPFFR1Q9GZQ6 430 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 ZMAT4Q9H898 229 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 ENY2Q9NPA8 101 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 ZNF71Q9NQZ8 489 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 TAAR3PQ9P1P4 343 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 OR1A1Q9P1Q5 309 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 BOD1L1Q8NFC6 3051 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 A0A0G2JRQ6 117 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 OOEPA6NGQ2 149 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 C11orf94C9JXX5 98 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 IGLV1-44P01699 117 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 NTF3P20783 257 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 GLRXP35754 106 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 IER3P46695 156 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 RPL24P83731 157 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 UTF1Q5T230 341 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 WDR86Q86TI4 376 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 CXorf67Q86X51 503 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 ZNF525Q8N782 197 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 FNDC4Q9H6D8 234 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 CCL28Q9NRJ3 127 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 MPC1Q9Y5U8 109 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 SELENOKQ9Y6D0 94 aa6.59□□□□□ -1.35
PDLIM5-221ENST00000542407 TEX48A0A1B0GUV7 120 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 MDFIC2A0A1B0GVS7 189 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 ANKRD30BLA7E2S9 258 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 RNF223E7ERA6 249 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 J3QR89 54 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 HSPB6O14558 160 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 SYNGR1O43759 233 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 PDCD6O75340 191 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 OR7C1O76099 320 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 417.6 ms