RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 C15orf53Q8NAA6 179 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 ZNF114Q8NC26 417 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 GJC3Q8NFK1 279 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 OR2A1Q8NGT9 310 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 SCAMP5Q8TAC9 235 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 MYOZ3Q8TDC0 251 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 LRRC29Q8WV35 223 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 TAF15Q92804 592 aaKnown RBP eCLIP4.28□□□□□ -1.72
SNHG1-218ENST00000541615 C11orf52Q96A22 123 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 TIMD4Q96H15 378 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 PRSS27Q9BQR3 290 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 NAA38Q9BRA0 125 aaKnown RBP4.28□□□□□ -1.72
SNHG1-218ENST00000541615 SCNM1Q9BWG6 230 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 PBOV1Q9GZY1 135 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 AP5S1Q9NUS5 200 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 ALKBH4Q9NXW9 302 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 C21orf62Q9NYP8 219 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 TECRQ9NZ01 308 aaKnown RBP4.28□□□□□ -1.72
SNHG1-218ENST00000541615 TP53TG1Q9Y2A0 90 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 MYLKQ15746 1914 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 ZNF236Q9UL36 1845 aa4.28□□□□□ -1.72
SNHG1-218ENST00000541615 CKAP5Q14008 2032 aa4.28□□□□□ -1.73
SNHG1-218ENST00000541615 HEATR5AQ86XA9 2040 aa4.28□□□□□ -1.73
SNHG1-218ENST00000541615 LTBP3Q9NS15 1303 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 TRBV7-7A0A0K0K1E9 115 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 NDUFC2-KCTD14E9PQ53 114 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 K7ENP7 123 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 DLL1O00548 723 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 HSPB6O14558 160 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 MPDU1O75352 247 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 NDUFB4O95168 129 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 IL4P05112 153 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 ACYP1P07311 99 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 PI3P19957 117 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 GRNP28799 593 aaKnown RBP4.27□□□□□ -1.73
SNHG1-218ENST00000541615 PRDX2P32119 198 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 TIRAPP58753 221 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 GNB1P62873 340 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 PLGLB1Q02325 96 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 RNPS1Q15287 305 aaKnown RBP4.27□□□□□ -1.73
SNHG1-218ENST00000541615 IZUMO4Q1ZYL8 232 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 WDR38Q5JTN6 314 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 HES3Q5TGS1 186 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 IL17RELQ6ZVW7 336 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 Q71RC1 249 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-218ENST00000541615 CEND1Q8N111 149 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 ZNF525Q8N782 197 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 PHLDA1Q8WV24 401 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-218ENST00000541615 FGF14Q92915 247 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 ZNF501Q96CX3 271 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-218ENST00000541615 DNAJA3Q96EY1 480 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 LINC01600Q96MT4 127 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 MGST2Q99735 147 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 SLC25A39Q9BZJ4 359 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-218ENST00000541615 TMEM222Q9H0R3 208 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 IL23AQ9NPF7 189 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 BEX4Q9NWD9 120 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-218ENST00000541615 TAS2R4Q9NYW5 299 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 SLC25A10Q9UBX3 287 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-218ENST00000541615 V9GYV3 84 aa4.27□□□□□ -1.73
SNHG1-218ENST00000541615 SBF1O95248 1867 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 IGLV3-10A0A075B6K4 115 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 A0A0A6YYD5 115 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 FAM90A5PA8MXJ8 464 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 LMX1BO60663 402 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 CST7O76096 145 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 PPYP01298 95 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 GYPBP06028 91 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 LGALS1P09382 135 aaKnown RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 IFI6P09912 130 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 NPPBP16860 134 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 BCL3P20749 454 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 NMUP48645 174 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 CLDN17P56750 224 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 PPP1CAP62136 330 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 SRSF2Q01130 221 aaKnown RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 PRDX1Q06830 199 aaKnown RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 FAM53BQ14153 422 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 MLF2Q15773 248 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 LINC01590Q5TEZ4 76 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 ACP7Q6ZNF0 438 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 FAM231DQ6ZW35 169 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 TRPT1Q86TN4 253 aaKnown RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 PRIMA1Q86XR5 153 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 SPACA3Q8IXA5 215 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 CIARTQ8N365 385 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 RPP25LQ8N5L8 163 aaKnown RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 ANKRD29Q8N6D5 301 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 RNF138Q8WVD3 245 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 ELSPBP1Q96BH3 223 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 WFDC6Q9BQY6 131 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 JPT2Q9H910 190 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 EDA2RQ9HAV5 297 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 HILPDAQ9Y5L2 63 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 R4GMQ9 66 aa4.26□□□□□ -1.73
SNHG1-218ENST00000541615 GREB1LQ9C091 1923 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-218ENST00000541615 KIAA1671Q9BY89 1806 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms