RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ZAR1Q86SH2 424 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 AHCTF1Q8WYP5 2266 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 NGFRP08138 427 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 GAGE2AQ6NT46 116 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 NEU4Q8WWR8 484 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-210ENST00000541363 PLEKHB2Q96CS7 222 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 FOXD3Q9UJU5 478 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-210ENST00000541363 PILRBQ9UKJ0 227 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 PEX11BO96011 259 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 RPP25Q9BUL9 199 aaKnown RBP12.98□□□□□ -0.33
HMGA2-210ENST00000541363 A0A1W2PRS3 328 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 DLX4Q92988 240 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-210ENST00000541363 PPP1R3EQ9H7J1 279 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 CD5LO43866 347 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 PRSS23O95084 383 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 SMPXQ9UHP9 88 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 IGFBP6P24592 240 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-210ENST00000541363 SLC25A38Q96DW6 304 aa12.98□□□□□ -0.33
HMGA2-210ENST00000541363 TCRBV4S1A1TA0A5B7 111 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 COX5BP10606 129 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 ZIC4Q8N9L1 334 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 RASL10AQ92737 203 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 TGIF1Q15583 401 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 C9orf153Q5TBE3 101 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 RNASE7Q9H1E1 156 aaKnown RBP12.97□□□□□ -0.33
HMGA2-210ENST00000541363 ABCA3Q99758 1704 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 C1QAP02745 245 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 CMC4P56277 68 aaPredicted RBP12.97□□□□□ -0.33
HMGA2-210ENST00000541363 COLCA1Q6ZS62 124 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 RFLNBQ8N5W9 214 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 C1orf122Q6ZSJ8 110 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 PDCD11Q14690 1871 aaKnown RBP12.97□□□□□ -0.33
HMGA2-210ENST00000541363 FER1L5A0AVI2 2057 aa12.97□□□□□ -0.33
HMGA2-210ENST00000541363 ZNF625Q96I27 306 aaPredicted RBP12.96□□□□□ -0.33
HMGA2-210ENST00000541363 TRAV14DV4A0A0A6YYC5 116 aa12.96□□□□□ -0.33
HMGA2-210ENST00000541363 CD300EQ496F6 205 aaPredicted RBP12.96□□□□□ -0.33
HMGA2-210ENST00000541363 CT83Q5H943 113 aa12.96□□□□□ -0.33
HMGA2-210ENST00000541363 RSPO3Q9BXY4 272 aaPredicted RBP12.96□□□□□ -0.33
HMGA2-210ENST00000541363 PLSCR4Q9NRQ2 329 aa12.96□□□□□ -0.33
HMGA2-210ENST00000541363 EFEMP2O95967 443 aa12.96□□□□□ -0.34
HMGA2-210ENST00000541363 ATP5G3P48201 142 aa12.96□□□□□ -0.34
HMGA2-210ENST00000541363 C1orf100Q5SVJ3 147 aa12.96□□□□□ -0.34
HMGA2-210ENST00000541363 MIR17HGQ75NE6 70 aa12.96□□□□□ -0.34
HMGA2-210ENST00000541363 H2BFSP57053 126 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 IFI27L1Q96BM0 104 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 GNB1LQ9BYB4 327 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 OR5P3Q8WZ94 311 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
HMGA2-210ENST00000541363 MAJINQ3KP22 176 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 ACP7Q6ZNF0 438 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 SNHG12Q9BXW3 62 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 IGKV1D-16P01601 117 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 ASPHD2Q6ICH7 369 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 ZNRF1Q8ND25 227 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 TMEM8BA6NDV4 472 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 LTBRP36941 435 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 GBF1Q92538 1859 aa12.95□□□□□ -0.34
HMGA2-210ENST00000541363 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 PRSS22Q9GZN4 317 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 ERCC8Q13216 396 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 TEX43Q6ZNM6 134 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 LHFPL6Q9Y693 200 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 LOC102723996A0A087X1L8 192 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 STPG1Q5TH74 334 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 NDUFAF3Q9BU61 184 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 PI4KAP42356 2102 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 PVRIGQ6DKI7 326 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 ALS2Q96Q42 1657 aa12.94□□□□□ -0.34
HMGA2-210ENST00000541363 TRAV8-3A0A0A6YYJ7 113 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 SRP19P09132 144 aaKnown RBP12.93□□□□□ -0.34
HMGA2-210ENST00000541363 FDCSPQ8NFU4 85 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 MSGN1A6NI15 193 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 INAFM2P0DMQ5 153 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 C6orf226Q5I0X4 101 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 C7orf69Q9H7B7 122 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 DTX4Q9Y2E6 619 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 CARHSP1Q9Y2V2 147 aaKnown RBP12.93□□□□□ -0.34
HMGA2-210ENST00000541363 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 MESP2Q0VG99 397 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 TMEM126AQ9H061 195 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 PRR19A6NJB7 356 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 GNG5P63218 68 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 ZNF708P17019 499 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 DUTP33316 252 aaKnown RBP12.93□□□□□ -0.34
HMGA2-210ENST00000541363 IGHV3OR16-8A0A075B7F1 116 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 IL9P15248 144 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 RIPPLY2Q5TAB7 128 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
HMGA2-210ENST00000541363 TRBV5-7A0A0A0MS05 114 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 APC2O95996 2303 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 A0A1W2PPV9 198 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 SPINK8P0C7L1 97 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 NSUN5P1Q3KNT7 163 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 FOXL1Q12952 345 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 RCHY1Q96PM5 261 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 ARAP2Q8WZ64 1704 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 CCL20P78556 96 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 SIGLEC15Q6ZMC9 328 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms