RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 C2orf83Q53S99 150 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 SLC25A24Q6NUK1 477 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 HSD17B13Q7Z5P4 300 aaPredicted RBP7.29□□□□□ -1.24
DDX55-208ENST00000541259 CENPVQ7Z7K6 275 aaPredicted RBP7.29□□□□□ -1.24
DDX55-208ENST00000541259 TCTE3Q8IZS6 198 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 SLC24A4Q8NFF2 622 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 THAP6Q8TBB0 222 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 DCUN1D4Q92564 292 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 BSCL2Q96G97 398 aaPredicted RBP7.29□□□□□ -1.24
DDX55-208ENST00000541259 TMEM68Q96MH6 324 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 CIB3Q96Q77 187 aaPredicted RBP7.29□□□□□ -1.24
DDX55-208ENST00000541259 KLK15Q9H2R5 256 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 ZNF355PQ9NSJ1 428 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 ZNF580Q9UK33 172 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 PAIP2BQ9ULR5 123 aaKnown RBP7.29□□□□□ -1.24
DDX55-208ENST00000541259 F11RQ9Y624 299 aaKnown RBP7.29□□□□□ -1.24
DDX55-208ENST00000541259 U3KQ87 197 aa7.29□□□□□ -1.24
DDX55-208ENST00000541259 FXYD6-FXYD2A0A087WZ82 144 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 CLPSL1A2RUU4 121 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 PMS2P5A8MQ11 134 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 OR2J3O76001 311 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 NDUFB8O95169 186 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 METTL15P1P0C7V9 234 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 SLC25A4P12235 298 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 DEFA4P12838 97 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 PVALBP20472 110 aaPredicted RBP7.28□□□□□ -1.24
DDX55-208ENST00000541259 NPY1RP25929 384 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 HTR2BP41595 481 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 P2RY1P47900 373 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 CAV2P51636 162 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 TAS2R30P59541 319 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 ARL16Q0P5N6 197 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 PVRIGQ6DKI7 326 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 TMEM14EPQ6UXP3 125 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 HAPLN4Q86UW8 402 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 KLHDC1Q8N7A1 406 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 ZNF114Q8NC26 417 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 OR1P1Q8NH06 330 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 OR4F5Q8NH21 305 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 WIPF2Q8TF74 440 aaPredicted RBP7.28□□□□□ -1.24
DDX55-208ENST00000541259 MISP3Q96FF7 219 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 LYRM2Q9NU23 88 aaPredicted RBP7.28□□□□□ -1.24
DDX55-208ENST00000541259 STRAPQ9Y3F4 350 aaKnown RBP7.28□□□□□ -1.24
DDX55-208ENST00000541259 RNF114Q9Y508 228 aa7.28□□□□□ -1.24
DDX55-208ENST00000541259 FBN1P35555 2871 aaKnown RBP7.27□□□□□ -1.25
DDX55-208ENST00000541259 IGLV11-55A0A075B6I3 123 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 TRBV9A0A0B4J1U6 114 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 PFDN1O60925 122 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 TSC22D2O75157 780 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 CST7O76096 145 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 IGHV3-48P01763 117 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 IGHG4P01861 327 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 TRGV3P03979 118 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 PET100P0DJ07 73 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 PF4V1P10720 104 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 SUB1P53999 127 aaKnown RBP eCLIP7.27□□□□□ -1.25
DDX55-208ENST00000541259 PROK1P58294 105 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 KRTAP10-3P60369 221 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 NHLH2Q02577 135 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 FGL1Q08830 312 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 KIAA0141Q14154 515 aaPredicted RBP7.27□□□□□ -1.25
DDX55-208ENST00000541259 TCTEX1D4Q5JR98 221 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 ZNF546Q86UE3 836 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 TMEM252Q8N6L7 170 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 OR5AU1Q8NGC0 362 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 PINX1Q96BK5 328 aaKnown RBP7.27□□□□□ -1.25
DDX55-208ENST00000541259 ANAPC16Q96DE5 110 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 GON7Q9BXV9 100 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 FNDC4Q9H6D8 234 aaPredicted RBP7.27□□□□□ -1.25
DDX55-208ENST00000541259 S4R3C0 116 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 TENM1Q9UKZ4 2725 aa7.27□□□□□ -1.25
DDX55-208ENST00000541259 TMEM89A2RUT3 159 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 PRSS46E5RG02 174 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 I3L2K1 104 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 K7EIM0 57 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 LY86O95711 162 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 IGHV3-23P01764 117 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 C1QBP02746 253 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 IFNA4P05014 189 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 OR8U8P0C7N1 319 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 CD28P10747 220 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 PSMB8P28062 276 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 RPL12P30050 165 aaKnown RBP7.26□□□□□ -1.25
DDX55-208ENST00000541259 ADMP35318 185 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 RAB9AP51151 201 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 TPPP2P59282 170 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 RAB11AP62491 216 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 RPP30P78346 268 aaKnown RBP7.26□□□□□ -1.25
DDX55-208ENST00000541259 SLC35B1P78383 322 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 RHOGP84095 191 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 EWSR1Q01844 656 aaKnown RBP eCLIP7.26□□□□□ -1.25
DDX55-208ENST00000541259 KLK9Q2XQG4 91 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 OR8G2PQ6IF36 304 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 ETV3LQ6ZN32 361 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 C11orf44Q8N8P7 122 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 MRPL36Q9P0J6 103 aaKnown RBP7.26□□□□□ -1.25
DDX55-208ENST00000541259 FBXL7Q9UJT9 491 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 KLK9Q9UKQ9 250 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 TNFSF18Q9UNG2 199 aa7.26□□□□□ -1.25
DDX55-208ENST00000541259 WNK1Q9H4A3 2382 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms