RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CR1P17927 2039 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 MAS1LP35410 378 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 HAGHQ16775 308 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 PVRIGQ6DKI7 326 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 ZNF709Q8N972 641 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 OR10G4Q8NGN3 311 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 OR10G9Q8NGN4 311 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 OR10G7Q8NGN6 311 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 MALSU1Q96EH3 234 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 PXMP4Q9Y6I8 212 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 TRAV1-1A0A0B4J248 108 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 IGHV1-69DA0A0B4J2H0 117 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 MAP1LC3B2A6NCE7 125 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 SH2D7A6NKC9 451 aaPredicted RBP9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 ACTL6BO94805 426 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 IGHV1-69P01742 117 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 APOC3P02656 99 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 FBP1P09467 338 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 SFTA3P0C7M3 94 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 TMEM11P17152 192 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 OPRK1P41145 380 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 DSCR9P59020 149 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 KLF17Q5JT82 389 aaPredicted RBP9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 C10orf91Q5T1B1 145 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 ASPHD1Q5U4P2 390 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 SPATA31B1PQ5VZV4 182 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 KRTAP1-3Q8IUG1 177 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 MAP1LC3BQ9GZQ8 125 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 BAHCC1Q9P281 2608 aa9.73□□□□□ -0.85
AP003559.1-201ENST00000540906 IGKV1D-37A0A075B6S9 117 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 A0A0U1RQK1 487 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 C17orf112F2Z3M2 114 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 SLC25A16P16260 332 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 OR10J1P30954 320 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 PPT1P50897 306 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 ICAM4Q14773 271 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 DEFB113Q30KQ7 82 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 TEPPQ6URK8 271 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 TMEM144Q7Z5S9 345 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 CCDC28AQ8IWP9 274 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 COMMD1Q8N668 190 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 STPG3Q8N7X2 389 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 Q8N9W7 124 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 ZNF114Q8NC26 417 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 GATAD1Q8WUU5 269 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 ACY3Q96HD9 319 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 HIF1ANQ9NWT6 349 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 KIAA1456Q9P272 454 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 SLC45A2Q9UMX9 530 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 APCP25054 2843 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 FLNBO75369 2602 aaKnown RBP9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 RBFOX3A6NFN3 312 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 NCBP2LA6PVI3 153 aaKnown RBP9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 RNF223E7ERA6 249 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 FNDC10F2Z333 226 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 MPDU1O75352 247 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 M6PRP20645 277 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 CX3CL1P78423 397 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 PRR20EP86478 221 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 PRR20CP86479 221 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 PRR20DP86480 221 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 PRR20BP86481 221 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 PRR20AP86496 221 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 FXYD3Q14802 87 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 PIFOQ8TCI5 191 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 RAB24Q969Q5 203 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 EIF5A2Q9GZV4 153 aaKnown RBP9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 C7orf69Q9H7B7 122 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 GNG13Q9P2W3 67 aa9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.72□□□□□ -0.85
AP003559.1-201ENST00000540906 CTXND1A0A1B0GTU2 59 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 F8W036 122 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 CNIH1O95406 144 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 EGR2P11161 476 aaPredicted RBP9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 GPX4P36969 197 aaPredicted RBP9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 ATP5IP56385 69 aaPredicted RBP9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 B2MP61769 119 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 LFNGQ8NES3 379 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 ABHD5Q8WTS1 349 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 NPIPB3Q92617 1050 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 HSPB9Q9BQS6 159 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 SLC25A33Q9BSK2 321 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 GSX1Q9H4S2 264 aaPredicted RBP9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 SLC39A9Q9NUM3 307 aa9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 F11RQ9Y624 299 aaKnown RBP9.71□□□□□ -0.85
AP003559.1-201ENST00000540906 UNC79Q9P2D8 2635 aa9.71□□□□□ -0.86
AP003559.1-201ENST00000540906 IGHV7-81A0A0B4J1V7 117 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 LOC102723971A0A1B0GUV8 181 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 B4DSR2 109 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 SEC14L6B5MCN3 397 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 CRYGCP07315 174 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 DEFA5Q01523 94 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 ACOT6Q3I5F7 207 aaPredicted RBP9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 ZNF506Q5JVG8 444 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 Q5PR19 223 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 TMEM219Q86XT9 240 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 RNASEH2CQ8TDP1 164 aaKnown RBP9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 RXFP4Q8TDU9 374 aa9.7□□□□□ -0.86
AP003559.1-201ENST00000540906 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms