RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 DNAH10Q8IVF4 4471 aa10.4□□□□□ -0.74
SNHG1-213ENST00000540725 TRAV14DV4A0A0A6YYC5 116 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 SMIM31A0A1B0GVY4 71 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 MPTX1A8MV57 137 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 GNG7O60262 68 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 APOA1P02647 267 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 RCVRNP35243 200 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 UCP3P55916 312 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 HSPE1P61604 102 aaKnown RBP10.39□□□□□ -0.75
SNHG1-213ENST00000540725 FAM90A2PQ658T7 463 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 GBGT1Q8N5D6 347 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 PHLDA1Q8WV24 401 aaPredicted RBP10.39□□□□□ -0.75
SNHG1-213ENST00000540725 CMTM3Q96MX0 182 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 A0A087WXM4 84 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 ERHP84090 104 aaKnown RBP10.39□□□□□ -0.75
SNHG1-213ENST00000540725 GATAD1Q8WUU5 269 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 GINS3Q9BRX5 216 aa10.39□□□□□ -0.75
SNHG1-213ENST00000540725 IZUMO4Q1ZYL8 232 aa10.38□□□□□ -0.75
SNHG1-213ENST00000540725 SPINK9Q5DT21 86 aa10.38□□□□□ -0.75
SNHG1-213ENST00000540725 TOMM20LQ6UXN7 152 aa10.38□□□□□ -0.75
SNHG1-213ENST00000540725 TCF24Q7RTU0 167 aa10.38□□□□□ -0.75
SNHG1-213ENST00000540725 RARRES2Q99969 163 aa10.38□□□□□ -0.75
SNHG1-213ENST00000540725 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 M0QYG6 137 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 CD5P06127 495 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 ELK1P19419 428 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 NPBWR1P48145 328 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 NCS1P62166 190 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 PAFAH1B2P68402 229 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 ST8SIA2Q92186 375 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 VSIRQ9H7M9 311 aa10.37□□□□□ -0.75
SNHG1-213ENST00000540725 ST8SIA3O43173 380 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 HPGDSO60760 199 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 IGKV1-5P01602 117 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 APOHP02749 345 aaPredicted RBP10.36□□□□□ -0.75
SNHG1-213ENST00000540725 PGAM2P15259 253 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 PI3P19957 117 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 SNCAP37840 140 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 RND3P61587 244 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 VBP1P61758 197 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 ZNF600Q6ZNG1 722 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 RPP25LQ8N5L8 163 aaKnown RBP10.36□□□□□ -0.75
SNHG1-213ENST00000540725 SLC35G3Q8N808 338 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 DUSP18Q8NEJ0 188 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 OR11H2Q8NH07 326 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 C11orf68Q9H3H3 251 aaKnown RBP10.36□□□□□ -0.75
SNHG1-213ENST00000540725 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
SNHG1-213ENST00000540725 PUS1Q9Y606 427 aaKnown RBP eCLIP10.36□□□□□ -0.75
SNHG1-213ENST00000540725 IGHV3-66A0A0C4DH42 116 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 DNASE2O00115 360 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-213ENST00000540725 DFFBO76075 338 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 TNFAIP8O95379 198 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 CA1P00915 261 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-213ENST00000540725 P0C879 139 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 AKR1C2P52895 323 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
SNHG1-213ENST00000540725 RNASE12Q5GAN4 147 aaKnown RBP10.35□□□□□ -0.75
SNHG1-213ENST00000540725 LILRB2Q8N423 598 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 ZNF486Q96H40 463 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-213ENST00000540725 TP53RKQ96S44 253 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 FUNDC2Q9BWH2 189 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 MS4A6AQ9H2W1 248 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 NDUFA13Q9P0J0 144 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 DNAH6Q9C0G6 4158 aa10.35□□□□□ -0.75
SNHG1-213ENST00000540725 TRAV2A0A0B4J234 112 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 A0A0B4J293 547 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 INS-IGF2F8WCM5 200 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 DEDDO75618 318 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 TMEM50AO95807 157 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 IFNA17P01571 189 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 PIGPP57054 158 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 DEFB131AP59861 70 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 RNASE10Q5GAN6 216 aaKnown RBP10.34□□□□□ -0.75
SNHG1-213ENST00000540725 LEMD1Q68G75 181 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 LGALS9CQ6DKI2 356 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 LHFPL1Q86WI0 220 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 C11orf45Q8TAV5 145 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 MFFQ9GZY8 342 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 FBXL17Q9UF56 701 aa10.34□□□□□ -0.75
SNHG1-213ENST00000540725 A0A1B0GU03 582 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 FAM25AB3EWG3 89 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 FAM25CB3EWG5 89 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 FAM25GB3EWG6 89 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 CORTO00230 105 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 ATG12O94817 140 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 RNASE2P10153 161 aaKnown RBP10.33□□□□□ -0.76
SNHG1-213ENST00000540725 RPL11P62913 178 aaKnown RBP10.33□□□□□ -0.76
SNHG1-213ENST00000540725 RBMS2Q15434 407 aaKnown RBP10.33□□□□□ -0.76
SNHG1-213ENST00000540725 PVRIGQ6DKI7 326 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 ARRDC1Q8N5I2 433 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 FAM24BQ8N5W8 94 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 PDCD10Q9BUL8 212 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 TMEM231Q9H6L2 316 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 KLK11Q9UBX7 282 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
SNHG1-213ENST00000540725 C3orf85A0A1B0GTC6 90 aa10.32□□□□□ -0.76
SNHG1-213ENST00000540725 DEFB4AO15263 64 aa10.32□□□□□ -0.76
SNHG1-213ENST00000540725 CD3DP04234 171 aa10.32□□□□□ -0.76
SNHG1-213ENST00000540725 IFNA4P05014 189 aa10.32□□□□□ -0.76
SNHG1-213ENST00000540725 ETV6P41212 452 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms