RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 FCN2Q15485 313 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 DEFB136Q30KP8 78 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 KLHL30-AS1Q8NEE0 82 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 OR11H7Q8NGC8 314 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 OR1P1Q8NH06 330 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 UBE2E2Q96LR5 201 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 DUX3Q96PT4 197 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 C11orf1Q9H5F2 150 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 ZFP57Q9NU63 452 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 MGAT4CQ9UBM8 478 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 FBXL7Q9UJT9 491 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 IGHV3-21A0A0B4J1V1 117 aa12.88□□□□□ -0.35
UBC-208ENST00000540700 K7EIM0 57 aa12.88□□□□□ -0.35
UBC-208ENST00000540700 SCGB1D2O95969 90 aa12.88□□□□□ -0.35
UBC-208ENST00000540700 TRBV12-3P01733 135 aa12.88□□□□□ -0.35
UBC-208ENST00000540700 IGHV3-23P01764 117 aa12.88□□□□□ -0.35
UBC-208ENST00000540700 NKX2-1P43699 371 aaPredicted RBP12.88□□□□□ -0.35
UBC-208ENST00000540700 PAX9P55771 341 aa12.88□□□□□ -0.35
UBC-208ENST00000540700 SLC25A24Q6NUK1 477 aa12.88□□□□□ -0.35
UBC-208ENST00000540700 GSG1LQ6UXU4 331 aa12.88□□□□□ -0.35
UBC-208ENST00000540700 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
UBC-208ENST00000540700 C15orf62A8K5M9 175 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 K7EPK0 472 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 WRBO00258 174 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 SYNGR2O43760 224 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 SSSCA1O60232 199 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 C15orf32Q32M92 178 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 NECAP1Q8NC96 275 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 SLC24A4Q8NFF2 622 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 CCDC140Q96MF4 163 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 OR4C12Q96R67 309 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 ENY2Q9NPA8 101 aa12.87□□□□□ -0.35
UBC-208ENST00000540700 FAM223BA6NKX1 122 aa12.86□□□□□ -0.35
UBC-208ENST00000540700 F8W735 103 aaPredicted RBP12.86□□□□□ -0.35
UBC-208ENST00000540700 I3L2K1 104 aa12.86□□□□□ -0.35
UBC-208ENST00000540700 IGHV3-48P01763 117 aa12.86□□□□□ -0.35
UBC-208ENST00000540700 LGALS1P09382 135 aaKnown RBP12.86□□□□□ -0.35
UBC-208ENST00000540700 EXOSC2Q13868 293 aaKnown RBP12.86□□□□□ -0.35
UBC-208ENST00000540700 MLANAQ16655 118 aa12.86□□□□□ -0.35
UBC-208ENST00000540700 FAM223AQ8IWN6 122 aa12.86□□□□□ -0.35
UBC-208ENST00000540700 C4orf3Q8WVX3 66 aa12.86□□□□□ -0.35
UBC-208ENST00000540700 RAX2Q96IS3 184 aa12.86□□□□□ -0.35
UBC-208ENST00000540700 FNDC4Q9H6D8 234 aaPredicted RBP12.86□□□□□ -0.35
UBC-208ENST00000540700 MRPL36Q9P0J6 103 aaKnown RBP12.86□□□□□ -0.35
UBC-208ENST00000540700 NUDT19A8MXV4 375 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 H3BP45 60 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 HIST1H1BP16401 226 aaKnown RBP12.85□□□□□ -0.35
UBC-208ENST00000540700 NPY1RP25929 384 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 SNCAP37840 140 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 HTR2BP41595 481 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 RUNX1Q01196 453 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 RAB32Q13637 225 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 C2orf83Q53S99 150 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 ZNF343Q6P1L6 599 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 Q6ZNX1 250 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 CACFD1Q9UGQ2 172 aa12.85□□□□□ -0.35
UBC-208ENST00000540700 LSM5Q9Y4Y9 91 aaKnown RBP12.85□□□□□ -0.35
UBC-208ENST00000540700 IGHV4OR15-8A0A075B7B6 117 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 A0A087WW49 117 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 H0YIZ8 118 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 MED6O75586 246 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 MT-CO2P00403 227 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
UBC-208ENST00000540700 MRPL41Q8IXM3 137 aaKnown RBP12.84□□□□□ -0.35
UBC-208ENST00000540700 ZNF502Q8TBZ5 544 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 PINX1Q96BK5 328 aaKnown RBP12.84□□□□□ -0.35
UBC-208ENST00000540700 ZNF414Q96IQ9 312 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 NMES1Q9C002 83 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 MED28Q9H204 178 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 HIPK2Q9H2X6 1198 aa12.84□□□□□ -0.35
UBC-208ENST00000540700 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
UBC-208ENST00000540700 A0A0G2JLM5 398 aa12.83□□□□□ -0.36
UBC-208ENST00000540700 ANKRD34BA5PLL1 514 aa12.83□□□□□ -0.36
UBC-208ENST00000540700 CCNKO75909 580 aa12.83□□□□□ -0.36
UBC-208ENST00000540700 FHL3Q13643 280 aa12.83□□□□□ -0.36
UBC-208ENST00000540700 OR1L6Q8NGR2 347 aa12.83□□□□□ -0.36
UBC-208ENST00000540700 CHAC2Q8WUX2 184 aa12.83□□□□□ -0.36
UBC-208ENST00000540700 U3KQ87 197 aa12.83□□□□□ -0.36
UBC-208ENST00000540700 DNAH9Q9NYC9 4486 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 PMS2P5A8MQ11 134 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 PRSS46E5RG02 174 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 PPP5D1E7EU14 171 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 IFNA10P01566 189 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 S100A10P60903 97 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 LRRC37A5PQ49AS3 106 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 SPANXN5Q5MJ07 72 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 OR11H1Q8NG94 326 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 SMIM8Q96KF7 97 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 PSENENQ9NZ42 101 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 OR5AC2Q9NZP5 309 aa12.82□□□□□ -0.36
UBC-208ENST00000540700 CCL24O00175 119 aa12.81□□□□□ -0.36
UBC-208ENST00000540700 BMPR1BO00238 502 aa12.81□□□□□ -0.36
UBC-208ENST00000540700 SUB1P53999 127 aaKnown RBP eCLIP12.81□□□□□ -0.361e-34■■■■□ 26.7
UBC-208ENST00000540700 SLURP1P55000 103 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms