RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 LOXP28300 417 aaPredicted RBP13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 CORO2AQ92828 525 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 PRO1933Q9H354 126 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 FBXL15Q9H469 300 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 TRAV20A0A0B4J274 112 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 PPIAL4CA0A0B4J2A2 164 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 CXorf65A6NEN9 183 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 PPIAL4GP0DN37 164 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 SSBP2P81877 361 aaPredicted RBP13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 PRSS8Q16651 343 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 KIR3DL3Q8N743 410 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 ZNF439Q8NDP4 499 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 OR52E5Q8NH55 327 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 PYYP10082 97 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 IL3RAP26951 378 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 OCC1Q8TAD7 63 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 LPAR2Q9HBW0 351 aa13.88□□□□□ -0.19
EPB41L3-204ENST00000540638 TEX36Q5VZQ5 186 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 RAI1Q7Z5J4 1906 aaPredicted RBP13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 VKORC1Q9BQB6 163 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 STAG3L2P0CL84 134 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 STAG3L3P0CL85 134 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 RANP62826 216 aaKnown RBP13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 LEMD1Q68G75 181 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 CDPF1Q6NVV7 123 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 PQLC2Q6ZP29 291 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 OR5AU1Q8NGC0 362 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 CTDSP1Q9GZU7 261 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 TRAPPC1Q9Y5R8 145 aa13.87□□□□□ -0.19
EPB41L3-204ENST00000540638 MEF2CQ06413 473 aaPredicted RBP13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 CDSNQ15517 529 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 MRPL41Q8IXM3 137 aaKnown RBP13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 OSR1Q8TAX0 266 aaPredicted RBP13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 IMMP2LQ96T52 175 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 IGKV1OR2-108A0A075B7D4 117 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 TRAV34A0A0B4J273 112 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 B9A039 149 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 IGHV1-8P0DP01 117 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 SUB1P53999 127 aaKnown RBP eCLIP13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 LINC01551Q86U37 167 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 OR10G8Q8NGN5 311 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 SLC45A2Q9UMX9 530 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 FCN3O75636 299 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 GNG4P50150 75 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 GGACTQ9BVM4 153 aa13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 PARD6GQ9BYG4 376 aaPredicted RBP13.86□□□□□ -0.19
EPB41L3-204ENST00000540638 CSPG4Q6UVK1 2322 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 A0A1B0GUS0 222 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 RBP4P02753 201 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 CDKN1AP38936 164 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 CDX1P47902 265 aaPredicted RBP13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 PPOXP50336 477 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 OR5B3Q8NH48 314 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 TECRQ9NZ01 308 aaKnown RBP13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 GRIFINA4D1Z8 144 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 HELTA6NFD8 242 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 LINC00587B1AMM8 73 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 USF1P22415 310 aaPredicted RBP13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 MMDQ15546 238 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 CR1LQ2VPA4 569 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 CENPVQ7Z7K6 275 aaPredicted RBP13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 VSTM2AQ8TAG5 236 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 LINC00479Q96M42 142 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 MYO18BQ8IUG5 2567 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 IGHV2-5P01817 119 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 SMIM6P0DI80 62 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 RNASE2P10153 161 aaKnown RBP13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 AREGP15514 252 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 HOXA5P20719 270 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 TAS2R45P59539 299 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 WT1-ASQ06250 92 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 KLRD1Q13241 179 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 ZNF672Q499Z4 452 aaPredicted RBP13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 C22orf15Q8WYQ4 148 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 TMEM186Q96B77 213 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 TMEM133Q9H2Q1 129 aa13.85□□□□□ -0.19
EPB41L3-204ENST00000540638 NCBP2LA6PVI3 153 aaKnown RBP13.84□□□□□ -0.19
EPB41L3-204ENST00000540638 LY86O95711 162 aa13.84□□□□□ -0.19
EPB41L3-204ENST00000540638 TMEM144Q7Z5S9 345 aa13.84□□□□□ -0.19
EPB41L3-204ENST00000540638 SFRP2Q96HF1 295 aa13.84□□□□□ -0.19
EPB41L3-204ENST00000540638 PACRGQ96M98 296 aaPredicted RBP13.84□□□□□ -0.19
EPB41L3-204ENST00000540638 PHOX2AO14813 284 aa13.84□□□□□ -0.19
EPB41L3-204ENST00000540638 VWC2Q2TAL6 325 aa13.84□□□□□ -0.19
EPB41L3-204ENST00000540638 TIGITQ495A1 244 aa13.84□□□□□ -0.19
EPB41L3-204ENST00000540638 FAM90A9PA6NNJ1 464 aa13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 SEC14L6B5MCN3 397 aa13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 DLL1O00548 723 aa13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 RPL27AP46776 148 aaKnown RBP13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 PRRX1P54821 245 aa13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 CD69Q07108 199 aa13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 PMS2P11Q13670 270 aa13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 SSX2Q16385 188 aa13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 Q8N7P7 452 aa13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 RNASE7Q9H1E1 156 aaKnown RBP13.83□□□□□ -0.19
EPB41L3-204ENST00000540638 TRBV20OR9-2A0A075B6H5 130 aa13.83□□□□□ -0.2
EPB41L3-204ENST00000540638 A0A1B0GWJ7 208 aa13.83□□□□□ -0.2
EPB41L3-204ENST00000540638 CBLN1P23435 193 aa13.83□□□□□ -0.2
EPB41L3-204ENST00000540638 MORN5Q5VZ52 161 aa13.83□□□□□ -0.2
EPB41L3-204ENST00000540638 SSBP3Q9BWW4 388 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms