RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 GABARAPH6UMI1 98 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 UBE2CO00762 179 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 CHEK1O14757 476 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 NUPL2O15504 423 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 MT-CO2P00403 227 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 UCP1P25874 307 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 TAS2R19P59542 299 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 KIR2DL5AQ8N109 375 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 UBAC2Q8NBM4 344 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 OR4D10Q8NGI6 311 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 KIR2DL5BQ8NHK3 375 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 BIRC6Q9NR09 4857 aa9.71□□□□□ -0.85
SEMA4D-223ENST00000540475 OR4C46A6NHA9 309 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 ATG12O94817 140 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 CTSDP07339 412 aaPredicted RBP9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 ATF4P18848 351 aaPredicted RBP9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 PI3P19957 117 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 APOC4P55056 127 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 MRPS10P82664 201 aaKnown RBP9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 IZUMO4Q1ZYL8 232 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 BSXQ3C1V8 233 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 ZFAND1Q8TCF1 268 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 MISP3Q96FF7 219 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 RNF2Q99496 336 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 C20orf24Q9BUV8 137 aa9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 MRPS26Q9BYN8 205 aaKnown RBP9.71□□□□□ -0.86
SEMA4D-223ENST00000540475 VPS13DQ5THJ4 4388 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 TRAV14DV4A0A0A6YYC5 116 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 CTDSPLO15194 276 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 ST8SIA3O43173 380 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 ZNF207O43670 478 aaKnown RBP9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 CDS2O95674 445 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 PGAM2P15259 253 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 TNFRSF9Q07011 255 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 STEAP1BQ6NZ63 245 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 CCDC71LQ8N9Z2 235 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 TMEM116Q8NCL8 245 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 OR13C8Q8NGS7 320 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 GALNT14Q96FL9 552 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 RHPN1-AS1Q9BWJ2 59 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
SEMA4D-223ENST00000540475 IGHV3OR16-8A0A075B7F1 116 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 CORTO00230 105 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 CTDSP2O14595 271 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 RAB3DO95716 219 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 TMEM50AO95807 157 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 CD5P06127 495 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 RNASE2P10153 161 aaKnown RBP9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 BMI1P35226 326 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 RPL5P46777 297 aaKnown RBP9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 MEF2DQ14814 521 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 SURF2Q15527 256 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 RNASE12Q5GAN4 147 aaKnown RBP9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 TOMM20LQ6UXN7 152 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 Q6ZRM9 215 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 DUSP18Q8NEJ0 188 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 OR52E5Q8NH55 327 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 RNF183Q96D59 192 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 BCL7BQ9BQE9 202 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 RTBDNQ9BSG5 229 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 ZFAND3Q9H8U3 227 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 MAP6D1Q9H9H5 199 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 COPZ2Q9P299 210 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 RABL2AQ9UBK7 228 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 UBQLN2Q9UHD9 624 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 RABL2BQ9UNT1 228 aa9.69□□□□□ -0.86
SEMA4D-223ENST00000540475 A0A0G2JRQ6 117 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 SPRY2O43597 315 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 GNG7O60262 68 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 IGHV3-48P01763 117 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 SNCAP37840 140 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 NPBWR1P48145 328 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 SUB1P53999 127 aaKnown RBP eCLIP9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 SPCS2Q15005 226 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 SP6Q3SY56 376 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 GPR141Q7Z602 305 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 FAM219AQ8IW50 185 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 MARCH1Q8TCQ1 289 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 GLYATL2Q8WU03 294 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 SMIM4Q8WVI0 70 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 TMEM222Q9H0R3 208 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 GPR132Q9UNW8 380 aa9.68□□□□□ -0.86
SEMA4D-223ENST00000540475 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 TRAV2A0A0B4J234 112 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 TEX13DA0A0J9YY54 714 aaPredicted RBP9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 YIF1AO95070 293 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 IFNA17P01571 189 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 ETV6P41212 452 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 AKR1C2P52895 323 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 PPP5CP53041 499 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 ZNF600Q6ZNG1 722 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 STPG3Q8N7X2 389 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 SLC35G3Q8N808 338 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 LHFPL5Q8TAF8 219 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 DYNC2LI1Q8TCX1 351 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 PINX1Q96BK5 328 aaKnown RBP9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 RRNAD1Q96FB5 475 aaKnown RBP9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 SOSTQ9BQB4 213 aa9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 GINS3Q9BRX5 216 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms