RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 AHRRA9YTQ3 701 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 OR4A47Q6IF82 309 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 EBLN2Q6P2I7 272 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 OR4C5Q8NGB2 326 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 GRAMD2BQ96HH9 432 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 GSX1Q9H4S2 264 aaPredicted RBP14.43□□□□□ -0.1
RAB40C-205ENST00000539661 LAMTOR5O43504 91 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 C8orf88P0DMB2 117 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 IGLL1P15814 213 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 PRDX2P32119 198 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 LOXL3P58215 753 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 EDDM3AQ14507 147 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-205ENST00000539661 TRIB1Q96RU8 372 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 MRPL32Q9BYC8 188 aaKnown RBP14.42□□□□□ -0.1
RAB40C-205ENST00000539661 C1RLQ9NZP8 487 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 MED13Q9UHV7 2174 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 C2orf70A6NJV1 201 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 HOXA4Q00056 320 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-205ENST00000539661 LRRC10Q5BKY1 277 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 PPP1R35Q8TAP8 253 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 TNFRSF19Q9NS68 423 aa14.42□□□□□ -0.1
RAB40C-205ENST00000539661 POU2AF1Q16633 256 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 Q56UQ5 140 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 DNAJC13O75165 2243 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 MGST3O14880 152 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 COL8A2P25067 703 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 ZNF134P52741 427 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 ARG2P78540 354 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 SLC25A33Q9BSK2 321 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 IDI2-AS1Q9NZ38 188 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 PRNDQ9UKY0 176 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 ZNF257Q9Y2Q1 563 aa14.41□□□□□ -0.1
RAB40C-205ENST00000539661 MFAP2P55001 183 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 ATP5L2Q7Z4Y8 100 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 ZPBPQ9BS86 351 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 ST20Q9HBF5 79 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 ATMQ13315 3056 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 C21orf140B9A014 251 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 PPBPP02775 128 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 IGHV1-2P23083 117 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 RHOGP84095 191 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 MZT1Q08AG7 82 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 Q6ZVH6 145 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 C1orf210Q8IVY1 113 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 PLPPR2Q96GM1 343 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 ADTRPQ96IZ2 230 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 OR51B2Q9Y5P1 312 aa14.4□□□□□ -0.1
RAB40C-205ENST00000539661 MAP1BP46821 2468 aaKnown RBP14.39□□□□□ -0.11
RAB40C-205ENST00000539661 TIMM8AO60220 97 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-205ENST00000539661 MEOX1P50221 254 aa14.39□□□□□ -0.11
RAB40C-205ENST00000539661 NUP35Q8NFH5 326 aa14.39□□□□□ -0.11
RAB40C-205ENST00000539661 FAM168AQ92567 244 aa14.39□□□□□ -0.11
RAB40C-205ENST00000539661 TMEM70Q9BUB7 260 aa14.39□□□□□ -0.11
RAB40C-205ENST00000539661 KLF13Q9Y2Y9 288 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-205ENST00000539661 CRXO43186 299 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-205ENST00000539661 CA1P00915 261 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-205ENST00000539661 CEACAM8P31997 349 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-205ENST00000539661 PRCDQ00LT1 54 aa14.39□□□□□ -0.11
RAB40C-205ENST00000539661 ZNF596Q8TC21 504 aa14.39□□□□□ -0.11
RAB40C-205ENST00000539661 LRRC29Q8WV35 223 aa14.39□□□□□ -0.11
RAB40C-205ENST00000539661 RAB9BQ9NP90 201 aa14.39□□□□□ -0.11
RAB40C-205ENST00000539661 RIF1Q5UIP0 2472 aaKnown RBP14.38□□□□□ -0.11
RAB40C-205ENST00000539661 IGKV1OR2-108A0A075B7D4 117 aa14.38□□□□□ -0.11
RAB40C-205ENST00000539661 GDF5OSQ5U4N7 250 aa14.38□□□□□ -0.11
RAB40C-205ENST00000539661 RNASEKQ6P5S7 137 aaKnown RBP14.38□□□□□ -0.11
RAB40C-205ENST00000539661 KLRC4-KLRK1H3BQV0 150 aa14.38□□□□□ -0.11
RAB40C-205ENST00000539661 REG1BP48304 166 aa14.38□□□□□ -0.11
RAB40C-205ENST00000539661 C2orf83Q53S99 150 aa14.38□□□□□ -0.11
RAB40C-205ENST00000539661 J3QR06 171 aa14.37□□□□□ -0.11
RAB40C-205ENST00000539661 SSBP3Q9BWW4 388 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-205ENST00000539661 DUSP13Q9UII6 198 aa14.37□□□□□ -0.11
RAB40C-205ENST00000539661 VWA1Q6PCB0 445 aa14.37□□□□□ -0.11
RAB40C-205ENST00000539661 SNRNP40Q96DI7 357 aaKnown RBP14.37□□□□□ -0.11
RAB40C-205ENST00000539661 LOXL4Q96JB6 756 aa14.37□□□□□ -0.11
RAB40C-205ENST00000539661 FAM167A-AS1Q96KT0 104 aa14.37□□□□□ -0.11
RAB40C-205ENST00000539661 NCOR1P1Q9H4R4 102 aa14.37□□□□□ -0.11
RAB40C-205ENST00000539661 ZNF355PQ9NSJ1 428 aa14.37□□□□□ -0.11
RAB40C-205ENST00000539661 AMMECR1Q9Y4X0 333 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-205ENST00000539661 DMXL2Q8TDJ6 3036 aa14.37□□□□□ -0.11
RAB40C-205ENST00000539661 RPL8P62917 257 aaKnown RBP14.36□□□□□ -0.11
RAB40C-205ENST00000539661 VAMP3Q15836 100 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 C1orf229Q6ZS94 237 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-205ENST00000539661 NUDT10Q8NFP7 164 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 NUDT11Q96G61 164 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 HINT2Q9BX68 163 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 ARRDC1-AS1Q9H2J1 176 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 CALYQ9NYX4 217 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 IGKV1D-17A0A075B6S4 117 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 CER1O95813 267 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 IGKV3-15P01624 115 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 HIST1H1EP10412 219 aaKnown RBP14.36□□□□□ -0.11
RAB40C-205ENST00000539661 UBE2L3P68036 154 aaKnown RBP14.36□□□□□ -0.11
RAB40C-205ENST00000539661 OR1L8Q8NGR8 309 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 SLC25A2Q9BXI2 301 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 CACNA1GO43497 2377 aa14.36□□□□□ -0.11
RAB40C-205ENST00000539661 A0A1B0GXF2 115 aa14.35□□□□□ -0.11
RAB40C-205ENST00000539661 SRRM5B3KS81 715 aa14.35□□□□□ -0.11
RAB40C-205ENST00000539661 LYZL6O75951 148 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms