RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ZP3P21754 424 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 GPR183P32249 361 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 HOXA1P49639 335 aaPredicted RBP12.02□□□□□ -0.48
RPAIN-206ENST00000539417 SRPXP78539 464 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.48
RPAIN-206ENST00000539417 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 SMCO1Q147U7 214 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 MLANAQ16655 118 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 RPEL1Q2QD12 228 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 PDLIM3Q53GG5 364 aaPredicted RBP12.02□□□□□ -0.48
RPAIN-206ENST00000539417 LYG2Q86SG7 212 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 OR52E5Q8NH55 327 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 TMEM170AQ8WVE7 144 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.48
RPAIN-206ENST00000539417 NUDT15Q9NV35 164 aa12.02□□□□□ -0.48
RPAIN-206ENST00000539417 ARL3P36405 182 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 BSXQ3C1V8 233 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 C4orf46Q504U0 113 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 C9orf66Q5T8R8 295 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 GGNBP1Q5YKI7 109 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 PVRIGQ6DKI7 326 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 ADAMTSL5Q6ZMM2 481 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 VN1R17PQ8TDU5 208 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
RPAIN-206ENST00000539417 CXorf58Q96LI9 332 aa12.02□□□□□ -0.49
RPAIN-206ENST00000539417 MRPL36Q9P0J6 103 aaKnown RBP12.02□□□□□ -0.49
RPAIN-206ENST00000539417 TRBV7-1A0A0A6YYK4 115 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 DUXBA0A1W2PPF3 345 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 WI2-2373I1.2A0A1W2PRP0 233 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 SAP30O75446 220 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 MT-CO2P00403 227 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 PPP1R14BQ96C90 147 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 SEC22CQ9BRL7 303 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 CHRDL1Q9BU40 450 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 RBKSQ9H477 322 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 THYN1Q9P016 225 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 HSPB7Q9UBY9 170 aa12.01□□□□□ -0.49
RPAIN-206ENST00000539417 A0A1B0GU03 582 aa12□□□□□ -0.49
RPAIN-206ENST00000539417 FAM240BA0A1B0GVZ2 78 aa12□□□□□ -0.49
RPAIN-206ENST00000539417 CEBPZOSA8MTT3 80 aa12□□□□□ -0.49
RPAIN-206ENST00000539417 GGCTO75223 188 aaKnown RBP12□□□□□ -0.49
RPAIN-206ENST00000539417 SNCAP37840 140 aa12□□□□□ -0.49
RPAIN-206ENST00000539417 OR9G4Q8NGQ1 327 aa12□□□□□ -0.49
RPAIN-206ENST00000539417 FNDC4Q9H6D8 234 aaPredicted RBP12□□□□□ -0.49
RPAIN-206ENST00000539417 C21orf62Q9NYP8 219 aa12□□□□□ -0.49
RPAIN-206ENST00000539417 SELENOKQ9Y6D0 94 aa12□□□□□ -0.49
RPAIN-206ENST00000539417 PFDN1O60925 122 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 CSN3P07498 182 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 H2AFB2P0C5Z0 115 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 ADMP35318 185 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 OXA1LQ15070 435 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 UNQ9165/PRO28630Q6UXU0 137 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 UBAC2Q8NBM4 344 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 OR1L6Q8NGR2 347 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 OR1S1Q8NH92 325 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 ENY2Q9NPA8 101 aa11.99□□□□□ -0.49
RPAIN-206ENST00000539417 HEYLQ9NQ87 328 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-206ENST00000539417 CYB5BO43169 146 aa11.98□□□□□ -0.49
RPAIN-206ENST00000539417 TGOLN2O43493 480 aa11.98□□□□□ -0.49
RPAIN-206ENST00000539417 MZT2BQ6NZ67 158 aa11.98□□□□□ -0.49
RPAIN-206ENST00000539417 NRARPQ7Z6K4 114 aa11.98□□□□□ -0.49
RPAIN-206ENST00000539417 MITD1Q8WV92 249 aa11.98□□□□□ -0.49
RPAIN-206ENST00000539417 MAGT1Q9H0U3 335 aa11.98□□□□□ -0.49
RPAIN-206ENST00000539417 TMED3Q9Y3Q3 217 aa11.98□□□□□ -0.49
RPAIN-206ENST00000539417 hCG_2014768A0A024R1R8 64 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 IGHV3OR16-8A0A075B7F1 116 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 K7EIL1 84 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 IAPPP10997 89 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 Q56UQ5 140 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 GPHB5Q86YW7 130 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 DTD1Q8TEA8 209 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 CACNG8Q8WXS5 425 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 OR10C1Q96KK4 312 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 PRR25Q96S07 402 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 GPR61Q9BZJ8 451 aa11.97□□□□□ -0.49
RPAIN-206ENST00000539417 CCSO14618 274 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 CTSGP08311 255 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 SLC25A6P12236 298 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 SPNP16150 400 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 DEFA1P59665 94 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 DEFA3P59666 94 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 PLET1Q6UQ28 207 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 SLC24A4Q8NFF2 622 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 COQ8AQ8NI60 647 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 OR4C12Q96R67 309 aa11.96□□□□□ -0.49
RPAIN-206ENST00000539417 DNAH9Q9NYC9 4486 aa11.96□□□□□ -0.5
RPAIN-206ENST00000539417 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 HTR2BP41595 481 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 MFAP4P55083 255 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 TM4SF20Q53R12 229 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 C2orf83Q53S99 150 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 REC114Q7Z4M0 266 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 ENKURQ8TC29 256 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 ZNF431Q8TF32 576 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-206ENST00000539417 BSCL2Q96G97 398 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-206ENST00000539417 ELOVL1Q9BW60 279 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 ZNF436Q9C0F3 470 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms