RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 IGHV3-48P01763 117 aa11.81□□□□□ -0.52
CIT-210ENST00000539413 ADMP35318 185 aa11.81□□□□□ -0.52
CIT-210ENST00000539413 TMEM268Q5VZI3 342 aa11.81□□□□□ -0.52
CIT-210ENST00000539413 SPSB3Q6PJ21 355 aa11.81□□□□□ -0.52
CIT-210ENST00000539413 TMEM190Q8WZ59 177 aa11.81□□□□□ -0.52
CIT-210ENST00000539413 PINX1Q96BK5 328 aaKnown RBP11.81□□□□□ -0.52
CIT-210ENST00000539413 WDR89Q96FK6 387 aaPredicted RBP11.81□□□□□ -0.52
CIT-210ENST00000539413 PRR13Q9NZ81 148 aa11.81□□□□□ -0.52
CIT-210ENST00000539413 UFC1Q9Y3C8 167 aa11.81□□□□□ -0.52
CIT-210ENST00000539413 INS-IGF2F8WCM5 200 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 CD7P09564 240 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 C8orf88P0DMB2 117 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 SNCAP37840 140 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 ELLP55199 621 aaPredicted RBP11.8□□□□□ -0.52
CIT-210ENST00000539413 CD81P60033 236 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 GUCA2BQ16661 112 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 ZNF57Q68EA5 555 aaPredicted RBP11.8□□□□□ -0.52
CIT-210ENST00000539413 BTNL8Q6UX41 500 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 FAM219AQ8IW50 185 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 TMEM61Q8N0U2 210 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 TOMM5Q8N4H5 51 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 GPR146Q96CH1 333 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 ZNF414Q96IQ9 312 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 WWC2-AS2Q96NR7 200 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 SCGB3A2Q96PL1 93 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 TMEM56-RWDD3S4R434 201 aa11.8□□□□□ -0.52
CIT-210ENST00000539413 IGHV3OR16-8A0A075B7F1 116 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 CTSGP08311 255 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 AKR1C4P17516 323 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 FAUP35544 74 aaKnown RBP11.79□□□□□ -0.52
CIT-210ENST00000539413 HOXA1P49639 335 aaPredicted RBP11.79□□□□□ -0.52
CIT-210ENST00000539413 MFAP4P55083 255 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 TMEM187Q14656 261 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 MARC2Q969Z3 335 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 GALNT14Q96FL9 552 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 NEURL2Q9BR09 285 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.79□□□□□ -0.52
CIT-210ENST00000539413 MRPL27Q9P0M9 148 aaKnown RBP11.79□□□□□ -0.52
CIT-210ENST00000539413 KCNIP3Q9Y2W7 256 aa11.79□□□□□ -0.52
CIT-210ENST00000539413 SORL1Q92673 2214 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 NDUFA4O00483 81 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 RNASE2P10153 161 aaKnown RBP11.78□□□□□ -0.52
CIT-210ENST00000539413 FCGR2BP31994 310 aaPredicted RBP11.78□□□□□ -0.52
CIT-210ENST00000539413 AP3S2P59780 193 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 SUPT4H1P63272 117 aaKnown RBP11.78□□□□□ -0.52
CIT-210ENST00000539413 AARDQ4LEZ3 155 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 PVRIGQ6DKI7 326 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 TXN2Q99757 166 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 C20orf24Q9BUV8 137 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 ENY2Q9NPA8 101 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 GAR1Q9NY12 217 aaKnown RBP11.78□□□□□ -0.52
CIT-210ENST00000539413 CACNG5Q9UF02 275 aa11.78□□□□□ -0.52
CIT-210ENST00000539413 NUPL2O15504 423 aaKnown RBP11.77□□□□□ -0.53
CIT-210ENST00000539413 ZNF207O43670 478 aaKnown RBP11.77□□□□□ -0.53
CIT-210ENST00000539413 SCAF4O95104 1147 aaKnown RBP11.77□□□□□ -0.53
CIT-210ENST00000539413 SPCS3P61009 180 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 SPANXN2Q5MJ10 180 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 TMED4Q7Z7H5 227 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 OR52E5Q8NH55 327 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 IL22RA2Q969J5 263 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 RCHY1Q96PM5 261 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 SRRQ9GZT4 340 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 WFDC10AQ9H1F0 79 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 TUBA4BQ9H853 241 aa11.77□□□□□ -0.53
CIT-210ENST00000539413 DAZ1Q9NQZ3 744 aaKnown RBP11.77□□□□□ -0.53
CIT-210ENST00000539413 HUWE1Q7Z6Z7 4374 aaKnown RBP11.76□□□□□ -0.53
CIT-210ENST00000539413 GNG7O60262 68 aa11.76□□□□□ -0.53
CIT-210ENST00000539413 NXPH3O95157 252 aa11.76□□□□□ -0.53
CIT-210ENST00000539413 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.53
CIT-210ENST00000539413 RELQ04864 619 aaPredicted RBP11.76□□□□□ -0.53
CIT-210ENST00000539413 BSXQ3C1V8 233 aa11.76□□□□□ -0.53
CIT-210ENST00000539413 DEFB125Q8N687 156 aa11.76□□□□□ -0.53
CIT-210ENST00000539413 TM2D3Q9BRN9 247 aa11.76□□□□□ -0.53
CIT-210ENST00000539413 ZMAT4Q9H898 229 aa11.76□□□□□ -0.53
CIT-210ENST00000539413 OR11H12B2RN74 326 aa11.75□□□□□ -0.53
CIT-210ENST00000539413 K7EMT4 169 aa11.75□□□□□ -0.53
CIT-210ENST00000539413 CORTO00230 105 aa11.75□□□□□ -0.53
CIT-210ENST00000539413 HAGHQ16775 308 aa11.75□□□□□ -0.53
CIT-210ENST00000539413 RBPMS2Q6ZRY4 209 aaKnown RBP11.75□□□□□ -0.53
CIT-210ENST00000539413 LYZL2Q7Z4W2 148 aa11.75□□□□□ -0.53
CIT-210ENST00000539413 DUSP18Q8NEJ0 188 aa11.75□□□□□ -0.53
CIT-210ENST00000539413 FNDC4Q9H6D8 234 aaPredicted RBP11.75□□□□□ -0.53
CIT-210ENST00000539413 MRPL36Q9P0J6 103 aaKnown RBP11.75□□□□□ -0.53
CIT-210ENST00000539413 TRAV25A0A0B4J276 109 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 A0A0B4J2A0 478 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 C15orf62A8K5M9 175 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 YIF1AO95070 293 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 SULT1A3P0DMM9 295 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 SULT1A4P0DMN0 295 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 ANXA3P12429 323 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 BAK1Q16611 211 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 MLANAQ16655 118 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 NMSQ5H8A3 153 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 LINC00322Q6ZN03 302 aaPredicted RBP11.74□□□□□ -0.53
CIT-210ENST00000539413 LGI3Q8N145 548 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 OR52B4Q8NGK2 314 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 DEDD2Q8WXF8 326 aa11.74□□□□□ -0.53
CIT-210ENST00000539413 HEYLQ9NQ87 328 aaPredicted RBP11.74□□□□□ -0.53
CIT-210ENST00000539413 SHPKQ9UHJ6 478 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms